Alignment of alleles: Goat (Capra hircus) TRBV12S1

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).


                                1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                               G   T   G   V   F   Q   T   P   K   Y   L   L   T   Q   M   G   T   K   T   S
  U59406  ,TRBV12S1*01        GGA ACA GGG GTT TTC CAG ACT CCA AAA TAT CTC CTC ACA CAG ATG GGG ACT AAG ACG TCC

                                                      ____________________CDR1-IMGT__________________
                               21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                               L   E   C   E   Q   K   L   N   H   D   N                               M   Y
  U59406  ,TRBV12S1*01        CTA GAA TGT GAG CAA AAG CTG AAC CAT GAT AAT ... ... ... ... ... ... ... ATG TAC

                                                                                          ______________CDR2-
                               41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                               W   Y   K   Q   D   S   K   K   L   L   K   A   M   F   H   Y   N   N   K   E
  U59406  ,TRBV12S1*01        TGG TAT AAG CAG GAC TCC AAG AAA TTG CTG AAG GCT ATG TTT CAC TAC AAT AAT AAG GAA

                              IMGT_______________
                               61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                               L                   V   E   N   E   T   V   P       S   R   F   S   P   E   S
  U59406  ,TRBV12S1*01        CTC ... ... ... ... GTT GAA AAT GAA ACG GTG CCA ... AGT CGT TTC TCA CCG GAG TCT


                               81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                               P       D   K   A   H   L   N   L   H   I   D   S   L   E   P   G   D   S   A
  U59406  ,TRBV12S1*01        CCT ... GAC AAA GCT CAT TTA AAC CTT CAC ATC GAC TCC CTG GAG CCA GGA GAC TCT GCC

                                              ___CDR3-IMGT___
                              101 102 103 104 105 106 107 108
                               V   Y   F   C   A   S   S   W
  U59406  ,TRBV12S1*01        GTG TAT TTC TGT GCC AGC AGC TGG    #c

#c: rearranged cDNA.

Created: 26/09/2002
Author: Géraldine Folch