Alignment of alleles: Goat (Capra hircus) TRBV15S1

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).


                                1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                               D   T   G   V   T   Q   T   P   R   N   R   I   A   V   T   G   K   S   T   V
  U59409 ,TRBV15S1*01         GAT ACC GGT GTT ACC CAG ACC CCA AGA AAT AGG ATC GCA GTC ACA GGA AAG AGC ACT GTA

                                                      ____________________CDR1-IMGT__________________
                               21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                               L   E   C   S   Q   T   K   G   H   E   S                               M   Y
  U59409 ,TRBV15S1*01         CTG GAA TGT TCT CAG ACT AAG GGC CAT GAG TCT ... ... ... ... ... ... ... ATG TAC

                                                                                          ______________CDR2-
                               41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                               W   Y   R   Q   D   P   G   R   G   L   R   L   I   Y   S   S   Y   D   I   N
  U59409 ,TRBV15S1*01         TGG TAT CGA CAG GAC CCT GGA CGG GGG CTC CGG CTG ATC TAC TCC TCC TAC GAT ATC AAT

                              IMGT_______________
                               61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                               G                   I   N   K   G   D   V   S       A   G   Y   N   V   S   R
  U59409 ,TRBV15S1*01         GGT ... ... ... ... ATT AAC AAA GGA GAT GTC TCT ... GCT GGG TAC AAT GTC TCT CGT


                               81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                               K       E   K   A   K   F   S   L   Y   L   D   A   A   T   P   N   Q   T   A
  U59409 ,TRBV15S1*01         AAG ... GAG AAG GCA AAA TTC TCC CTC TAC CTA GAC GCT GCT ACC CCC AAC CAG ACG GCC

                                              ___CDR3-IMGT___
                              101 102 103 104 105 106 107 108
                               I   Y   F   C   A   S   S   G
  U59409 ,TRBV15S1*01         ATT TAC TTC TGT GCC AGC TCA GGC    #c

#c: rearranged cDNA.

Created: 26/09/2002
Author: Géraldine Folch