Alignment of alleles: Goat (Capra hircus) TRBV2S2

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).


                                1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                               E   A   E   V   T   Q   T   P   G   H   L   V   Q   G   K   G   L   E   V   E
  U59412  ,TRBV2S2*01         GAG GCA GAA GTC ACC CAG ACT CCA GGG CAC CTG GTT CAA GGG AAA GGA CTG GAA GTG GAA

                                                      ____________________CDR1-IMGT__________________
                               21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                               M   Y   C   V   P   K   K   G   H   I   Y                               V   F
  U59412  ,TRBV2S2*01         ATG TAT TGT GTT CCC AAA AAA GGA CAT ATT TAT ... ... ... ... ... ... ... GTT TTC

                                                                                          ______________CDR2-
                               41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                               W   Y   Q   Q   I   L   A   K   E   F   K   F   L   I   S   F   Q   N   D   K
  U59412  ,TRBV2S2*01         TGG TAT CAG CAG ATC CTG GCA AAA GAG TTC AAG TTC TTG ATT TCC TTC CAA AAT GAT AAA

                              IMGT_______________
                               61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                               V                   L   D   D   K   E   M   P   K   K   R   F   S   A   K   C
  U59412  ,TRBV2S2*01         GTC ... ... ... ... TTG GAT GAT AAA GAG ATG CCC AAG AAG AGA TTT TCA GCT AAG TGC


                               81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                               P       S   N   S   P   C   S   L   K   I   Q   P   A   E   P   Q   D   S   A
  U59412  ,TRBV2S2*01         CCC ... TCA AAC TCA CCT TGT AGT CTG AAG ATC CAG CCT GCA GAG CCA CAG GAC TCA GCT

                                              ___CDR3-IMGT___
                              101 102 103 104 105 106 107 108
                               M   Y   F   C   A   S   S   D
  U59412  ,TRBV2S2*01         ATG TAT TTC TGT GCC AGC AGT GAT    #c

#c: rearranged cDNA.

Created: 26/09/2002
Author: Géraldine Folch