Alignment of alleles: Goat (Capra hircus) TRBV7S1

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).


                                1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                               G   A   M   V   I   Q   N   P   R   Y   L   V   T   G   L   G   K   P   V   T
  AF035479,TRBV7S1*01         GGA GCC ATG GTC ATT CAG AAC CCA AGA TAC CTG GTT ACC GGG CTG GGA AAA CCA GTG ACC

                                                      ____________________CDR1-IMGT__________________
                               21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                               L   S   C   S   Q   D   M   K   R   D   V                               M   Y
  AF035479,TRBV7S1*01         CTG AGC TGT TCT CAG GAT ATG AAG CGT GAT GTC ... ... ... ... ... ... ... ATG TAC

                                                                                          ______________CDR2-
                               41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                               W   Y   Q   Q   K   P   S   Q   A   P   K   L   L   L   Y   Y   Y   D   K   E
  AF035479,TRBV7S1*01         TGG TAC CAA CAG AAG CCA AGC CAA GCA CCA AAA CTG CTG TTG TAC TAC TAT GAC AAA GAA

                              IMGT_______________
                               61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                               I                   T   R   E   K   N   T   S       E   N   F   Q   S   S   R
  AF035479,TRBV7S1*01         ATC ... ... ... ... ACC AGG GAG AAA AAC ACC TCT ... GAA AAC TTC CAG TCC AGC CGG


                               81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                               P       N   T   S   F   C   S   L   D   I   R   S   A   G   L   G   D   S   A
  AF035479,TRBV7S1*01         CCT ... AAC ACC TCT TTC TGT TCT CTT GAC ATC CGC TCG GCA GGC CTG GGG GAC TCA GCC

                                              ___CDR3-IMGT___
                              101 102 103 104 105 106 107
                               V   Y   L   C   A   S   S
  AF035479,TRBV7S1*01         GTG TAT CTC TGT GCC AGC AGT    #c

#c: rearranged cDNA.

Created: 26/09/2002
Author: Géraldine Folch