Alignment of alleles: Channel catfish (Ictalurus punctatus) IGIV1S3

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                 Q   I   T   V   T   Q   T   P   A   V   K   S   A   L   P   G   E   T   V   T
  AY165787,IGIV1S3*01           CAA ATC ACA GTA ACT CAG ACT CCT GCA GTG AAA TCT GCT CTT CCA GGA GAA ACA GTC ACC

                                                        _________________CDR1-IMGT______________________
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 I   N   C   R   T   S   Q   A   G   I   N   D   N   W                   L   H
  AY165787,IGIV1S3*01           ATC AAC TGT AGA ACC AGT CAG GCA GGA ATT AAT GAT AAC TGG ... ... ... ... TTA CAC

                                                                                            _____________CDR2-IM
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   Y   Q   Q   K   P   G   E   A   P   K   L   L   I   L   Y   A   N
  AY165787,IGIV1S3*01           TGG TAT CAG CAG AAA CCT GGA GAA GCT CCT AAA CTA CTG ATT CTA TAT GCG AAT ... ...

                                GT__________________
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                                     R   L   Q   S   G   F   P       A   R   F   K   G   S   G
  AY165787,IGIV1S3*01           ... ... ... ... ... AGG CTA CAG TCA GGT TTT CCA ... GCT CGT TTC AAA GGC AGT GGA

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                         S   R   S   D   F   T   L   T   I   T   G   V   L   T   E   D   A   G
  AY165787,IGIV1S3*01           ... ... TCT CGA TCT GAT TTC ACT CTG ACC ATC ACT GGG GTC CTT ACT GAA GAT GCA GGA

                                                ___________________CDR3-IMGT________________________
                                101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116
                                 D   Y   Y   C   Q   S   Y   H   Y   I   S   S   T   D   L   F
  AY165787,IGIV1S3*01           GAT TAT TAC TGT CAG AGT TAC CAT TAT ATC AGT AGC ACC GAC CTG TTC A

This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 03/03/2003
Author: Nathalie Bosc