Alignment of alleles: Channel catfish (Ictalurus punctatus) IGIV1S7

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                                                             S   V   S   P   G   Q   S   V   T 
  U25703  ,IGIV1S7*01                                                     G TCT GTT TCT CCA GGA CAA TCT GTT ACT

                                                         __________________CDR1-IMGT____________________        
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 L   T   C   T   S   S   Q   G   V   S   N   N                           L   N 
  U25703  ,IGIV1S7*01           CTC ACC TGT ACA TCC AGT CAG GGT GTT AGC AAT AAC ... ... ... ... ... ... CTC AAC

                                                                                            ______________CDR2-
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   Y   L   Q   K   P   G   E   A   P   K   L   L   I   Y   Y   A   S         
  U25703  ,IGIV1S7*01           TGG TAC CTG CAG AAA CCT GGA GAA GCT CCT AAA CTC CTG ATC TAT TAT GCA TCT ... ...

                                IMGT________________                                                            
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                                     N   R   Q   S   G   I   P       D   R   F   S   G   S   G 
  U25703  ,IGIV1S7*01           ... ... ... ... ... AAC CGT CAG TCT GGG ATT CCA ... GAT CGT TTC AGT GGC AGT GGA

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                         S   G   S   Q   F   S   L   K   I   S   G   V   Q   S   E   D   A   G 
  U25703  ,IGIV1S7*01           ... ... TCT GGT TCA CAG TTT AGT CTT AAA ATC TCT GGA GTT CAG TCT GAA GAT GCA GGA

                                                ________CDR3-IMGT__________
                                101 102 103 104 105 106 107 108 109 110 111
                                 D   Y   Y   C   P   Q   Y   S   S   F   P  
  U25703  ,IGIV1S7*01           GAT TAT TAC TGT CCG CAG TAT AGC AGC TTT CCG    #c
#c: rearranged cDNA

This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 03/03/2003
Author: Nathalie Bosc