Alignment of alleles: Torafugu (Takifugu rubripes) IGHV1S4

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                 D   A   Q   T   L   T   Q   S   E   P   V   V   K   R   P   G   E   S   H   T
  AF108422,IGHV1S4*01           GAT GCT CAG ACT CTG ACC CAG TCT GAA CCA GTG GTT AAA AGA CCT GGA GAA TCT CAC ACA

                                                        _________________CDR1-IMGT______________________
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 L   T   C   S   A   S   G   F   T   F   S   S   Y   W                   M   H
  AF108422,IGHV1S4*01           CTG ACC TGT TCA GCC TCT GGA TTC ACA TTC AGC AGC TAC TGG ... ... ... ... ATG CAC

                                                                                            _____________CDR2-IM
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   V   R   Q   A   P   G   K   G   L   E   W   I   S   A   I   S   T   G   S
  AF108422,IGHV1S4*01           TGG GTC AGA CAG GCT CCT GGA AAA GGA CTG GAG TGG ATC AGT GCT ATC AGC ACT GGC AGC

                                GT__________________
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                 S   Q               Y   Y   S   E   S   V   K       G   R   F   I   I   S   R
  AF108422,IGHV1S4*01           AGC CAG ... ... ... TAC TAC TCT GAG TCA GTC AAA ... GGC CGG TTT ATC ATC TCC AGA


                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                 D   N   N   R   A   Q   L   N   L   Q   M   N   S   L   K   T   E   D   S   A
  AF108422,IGHV1S4*01           GAC AAC AAC AGA GCA CAG CTG AAT CTG CAG ATG AAC AGC CTG AAG ACT GAA GAT TCT GCT

                                                __CDR3-IMGT__
                                101 102 103 104 105 106 107
                                 V   Y   Y   C   A   R   W
  AF108422,IGHV1S4*01           GTT TAT TAT TGT GCT CGA TGG T

This alignement has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 03/07/2003
Author: Nathalie Bosc