Alignment of alleles: Torafugu (Takifugu rubripes) TRAV2S2

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

N (Asn, asparagine) of potential N-glycosylation sites (NXS/T, where X is different from P), (N-linked glycosylation) is shown is green (site is underlined in CHS and in pages edited before 14/10/2009).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
E D K V M Q P P E D V V A A E G D T V T
AF269202,TRAV2S2*01 GAA GAC AAA GTG ATG CAG CCA CCA GAA GAT GTT GTT GCT GCT GAA GGA GAC ACT GTT ACA

_________________CDR1-IMGT______________________
21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40
L D C T F Q T T D T S P N L F
AF269202,TRAV2S2*01 CTG GAC TGT ACT TTT CAG ACC ACC GAC ACA TCC CCG AAC ... ... ... ... ... TTG TTC

_____________CDR2-IM 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 W Y K Q E N N K F P K L L L R A K Q K AF269202,TRAV2S2*01 TGG TAC AAA CAG GAA AAC AAC AAA TTT CCT AAA TTG CTT CTT CGG GCC AAG CAG AAA ...

GT__________________
61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80
P S D P Q R I S
AF269202,TRAV2S2*01 ... ... ... ... ... CCT TCA GAT CCA CAG ... ... ... ... ... ... ... AGA ATT TCT

81 82 83 84 84A 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
A F I N K T S V P L K I Q E L Q L S D S A
AF269202,TRAV2S2*01 GCT TTC ATC AAT AAG ACG TCA GTT CCT CTG AAG ATC CAG GAG CTT CAG CTG TCA GAC TCT GCA

___CDR3-IMGT___ 101 102 103 104 105 106 107 108 V Y Y C A L R AF269202,TRAV2S2*01 GTG TAC TAC TGT GCT CTG AGG CC



This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 30/06/2003
Author: Nathalie Bosc