Alignment of alleles: African clawed frog (Xenopus laevis) IGHV11S1

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20

  M27255  ,IGHV11S1*01

                                                        _________________CDR1-IMGT______________________
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 L   T   C   K   T   S   G   Y   D   F   G   S   Y   G                   M   N
  M27255  ,IGHV11S1*01          TTA ACT TGC AAA ACC TCA GGG TAT GAT TTT GGC AGC TAT GGT ... ... ... ... ATG AAC

                                                                                            _____________CDR2-IM
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   V   Q   Q   I   P   G   K   G   L   A   W   V   A   N   I   N   T   E   T
  M27255  ,IGHV11S1*01          TGG GTT CAG CAG ATC CCA GGA AAA GGT TTA GCG TGG GTT GCC AAT ATA AAT ACT GAA ACT

                                GT__________________
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                 G   N   T           V   Y   P   S   S   F   K       G   R   F   T   I   T   K
  M27255  ,IGHV11S1*01          GGC AAC ACA ... ... GTC TAT CCT TCA TCA TTT AAA ... GGA AGA TTT ACA ATC ACC AAA

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                 D   N   S   I   S   T   A   Y   L   E   I   S   S   L   K   P   E   D   T   A
  M27255  ,IGHV11S1*01          GAC AAT TCA ATT AGT ACA GCC TAT CTG GAG ATA AGC AGC CTG AAG CCA GAA GAT ACT GCA

                                                CDR3-IMGT__
                                101 102 103 104 105 106
                                 T   Y   Y   C   A   N
  M27255  ,IGHV11S1*01          ACC TAT TAC TGT GCA AAC #c
#c : rearranged cDNA

This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 06/08/2003
Author: Delphine Guiraudou