Alignment of alleles: African clawed frog (Xenopus laevis) IGHV3S1

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                 Q   I   S   L   T   Q   P   G   T       V   T   V   K   P   S   E   V   L   Q
  M24675  ,IGHV3S1*01           CAG ATC TCC CTG ACA CAG CCT GGT ACT ... GTC ACT GTG AAG CCA TCA GAG GTT CTT CAG

                                                        _________________CDR1-IMGT______________________
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 L   T   C   K   V   T   G   A   S   L   T   D   S   S   K   I   A   C   V   Q
  M24675  ,IGHV3S1*01           TTG ACC TGT AAA GTG ACC GGA GCC TCC CTC ACT GAC AGC TCT AAA ATA GCA TGT GTT CAG

                                                                                            _____________CDR2-IM
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   V   R   Q   P   V   G   K   G   L   E   W   L   G   G   I   W   Y   E   A
  M24675  ,IGHV3S1*01           TGG GTC CGT CAG CCT GTG GGG AAA GGG CTG GAG TGG CTG GGA GGG ATA TGG TAC GAA GCC

                                GT__________________
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                 S   L               H   Y   S   Q   S   L   K       G   R   V   T   V   S   R
  M24675  ,IGHV3S1*01           TCC CTG ... ... ... CAC TAT TCC CAG TCT TTG AAG ... GGA CGT GTC ACA GTA TCA AGA

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                 D   T   N   K   G   E   V   Y   L   K   L   T   G   M   K   P   E   E   T   A
  M24675  ,IGHV3S1*01           GAC ACA AAT AAA GGA GAA GTT TAT TTA AAA CTC ACT GGA ATG AAA CCA GAG GAA ACT GCT

                                                CDR3-IMGT__
                                101 102 103 104 105 106
                                 V   Y   Y   C   A   T
  M24675  ,IGHV3S1*01           GTA TAT TAC TGT GCT ACA #c
#c : rearranged cDNA

This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 06/08/2003
Author: Delphine Guiraudou