Alignment of alleles: African clawed frog (Xenopus laevis) IGHV9S1

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                 E   I   L   L   T   Q   S   N   P       E   I   K   K   P   G   E   S   V   K
  M24681  ,IGHV9S1*01           GAA ATC CTT CTC ACT CAA TCC AAC CCA ... GAA ATT AAG AAG CCT GGC GAA AGT GTG AAA

                                                        _________________CDR1-IMGT______________________
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 I   T   C   K   T   S   G   F   T   F   T   D   Y   Y                   M   H
  M24681  ,IGHV9S1*01           ATA ACC TGT AAA ACA TCA GGG TTC ACT TTC ACT GAT TAT TAC ... ... ... ... ATG CAT

                                                                                            _____________CDR2-IM
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   V   R   Q   A   P   R   G   G   L   Q   W   I   G   G   I   D   P   D   D
  M24681  ,IGHV9S1*01           TGG GTT CGA CAA GCC CCA CGA GGA GGA TTA CAG TGG ATA GGC GGA ATT GAT CCT GAT GAT

                                GT__________________
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                 G   E               T   N   Y   L   S   S   L       E   E   R   L   T   V   T
  M24681  ,IGHV9S1*01           GGG GAA ... ... ... ACT AAC TAT TTA TCT TCA TTG ... GAA GAA AGA TTA ACA GTG ACT

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                 T   D   N   S   I   S   T   V   Y   L   E   I   S   R   L   M   L   E   D   T
  M24681  ,IGHV9S1*01           ACA GAT AAT TCA ATT AGT ACA GTG TAC TTA GAG ATC AGC CGT TTG ATG CTG GAA GAC ACA

                                                DR3-IMGT____
                                101 102 103 104 105 106 107
                                 A   T   Y   Y   C   A   R
  M24681  ,IGHV9S1*01           GCC ACA TAT TAT TGT GCT AGA #c
#c : rearranged cDNA

This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 06/08/2003
Author: Delphine Guiraudou