Alignment of alleles: African clawed frog (Xenopus laevis) TRBV3

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

N (Asn, asparagine) of potential N-glycosylation sites (NXS/T, where X is different from P), (N-linked glycosylation) is shown is green (site is underlined in CHS and in pages edited before 14/10/2009).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                 G   I   V   V   T   Q   E   K   K   Q   L   T   V   N   P   G   D   S   V   A
  U60432  ,TRBV3*01             GGG ATT GTG GTG ACT CAA GAG AAG AAG CAG CTG ACG GTG AAT CCT GGA GAC TCT GTG GCC

                                                        ___________________CDR1-IMGT____________________
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 L   P   C   H   H   D   D   K   S   G   T   Y   D   T                   M   L
  U60432  ,TRBV3*01             CTT CCC TGT CAC CAT GAC GAT AAG TCT GGC ACC TAT GAT ACT ... ... ... ... ATG CTC

                                                                                            _______________CDR2-
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   Y   Q   Q   K   S   G   G   A   L   M   V   L   A   V   S   I   G   K   N
  U60432  ,TRBV3*01             TGG TAC CAG CAG AAA TCA GGG GGG GCA CTG ATG GTC TTG GCT GTA TCC ATA GGA AAG AAC

                                IMGT________________
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                                     D   S   T   I   E   E   Q   F   R   D   T   W   T   M   E
  U60432  ,TRBV3*01             ... ... ... ... ... GAT TCC ACC ATA GAG GAA CAA TTC AGG GAC ACT TGG ACT ATG GAG

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                 R   P   D   I   E   N   S   V   L   S   R   G   N   V   A   P   Q   D   S   A
  U60432  ,TRBV3*01             AGA CCC GAT ATC GAA AAC TCA GTT CTG AGC AGG GGG AAT GTG GCC CCC CAG GAC TCA GCA

                                                _______CDR3-IMGT____
                                101 102 103 104 105 106 107 108
                                 M   Y   Y   C   A   A   R   K
  U60432  ,TRBV3*01             ATG TAT TAT TGT GCA GCG AGG AAA  #c


#c: rearranged cDNA.


This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: Tuesday, 16-Jun-2020 15:26:45 CEST
Author: Delphine Guiraudou