Alignment of alleles: African clawed frog (Xenopus laevis) TRBV5

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

N (Asn, asparagine) of potential N-glycosylation sites (NXS/T, where X is different from P), (N-linked glycosylation) is shown is green (site is underlined in CHS and in pages edited before 14/10/2009).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                 G   V   K   V   T   Q   V   Q   K   L   L   I   I   K   S   G   E   A   A   E
  U60424  ,TRBV5*01             GGG GTG AAA GTG ACT CAA GTC CAG AAG CTT CTG ATT ATC AAG TCG GGG GAA GCT GCA GAA

                                                        ___________________CDR1-IMGT____________________
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 L   Y   C   E   H   D   D   S   S   Y   Y   N                           M   F
  U60424  ,TRBV5*01             CTT TAC TGT GAA CAT GAT GAC AGC AGC TAC TAT AAC ... ... ... ... ... ... ATG TTC

                                                                                            _______________CDR2-
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   Y   Q   Q   K   P   D   Q   G   L   K   L   M   L   H   S   L   N   V   G
  U60424  ,TRBV5*01             TGG TAC CAA CAG AAA CCG GAC CAG GGA CTG AAG CTC ATG CTC CAC TCA CTA AAT GTT GGC

                                IMGT________________
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                                     S   E   D   V   E   S   D   Y   K   D   N   W   G   T   D
  U60424  ,TRBV5*01             ... ... ... ... ... TCT GAA GAT GTG GAA AGT GAC TAT AAA GAC AAC TGG GGG ACC GAT

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                 R   K   F   V   L   N   S   T   L   I   L   K   K   G   N   V   E   D   S   A
  U60424  ,TRBV5*01             AGA AAA TTT GTC CTG AAT TCA ACT CTG ATT CTG AAG AAA GGG AAC GTG GAA GAT TCT GCC

                                                _____CDR3-IMGT______
                                101 102 103 104 105 106 107 108 109
                                 T   Y   F   C   A   A   R   S   G
  U60424  ,TRBV5*01             ACT TAT TTC TGT GCT GCG AGG TCG GGA  #c

#c: rearranged cDNA.


This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: Tuesday, 16-Jun-2020 15:26:45 CEST
Author: Delphine Guiraudou