Alignment of alleles: African clawed frog (Xenopus laevis) TRBV7

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

N (Asn, asparagine) of potential N-glycosylation sites (NXS/T, where X is different from P), (N-linked glycosylation) is shown is green (site is underlined in CHS and in pages edited before 14/10/2009).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                 M   E   S   V   F   Q   E   H   K   L   I   V   V   P   A   G   G   P   V   D
  U60430  ,TRBV7*01             ATG GAG AGT GTG TTT CAG GAG CAC AAG TTG ATA GTG GTC CCT GCT GGG GGC CCA GTG GAC

                                                        ___________________CDR1-IMGT____________________
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 L   Y   C   K   H   N   H   S   N   S   M   A                           M   L
  U60430  ,TRBV7*01             CTT TAC TGT AAA CAT AAT CAC AGC AAC TCC ATG GCA ... ... ... ... ... ... ATG CTC

                                                                                            _______________CDR2-
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   Y   Q   Q   K   T   G   Q   G   L   K   L   M   V   Y   S   S   G   P
  U60430  ,TRBV7*01             TGG TAT CAG CAG AAG ACT GGG CAG GGG CTG AAG CTC ATG GTC TAT TCC TCA GGT CCT ...

                                IMGT________________
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                                     N   S   G   E   M   E   E   X   F   Q   S   W   T   L   N
  U60430  ,TRBV7*01             ... ... ... ... ... AAT TCT GGG GAA ATG GAA GAA NNA TTT CAG TCC TGG ACA CTG AAC

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                 R   P   D   I   F   T   F   N   L   S   L   K   V   A   G   S   S   D   S   A
  U60430  ,TRBV7*01             AGA CCT GAT ATT TTC ACT TTC AAC CTG AGC CTG AAG GTG GCA GGG AGT AGT GAC TCG GCT

                                                _CDR3-IMGT
                                101 102 103 104 105
                                 E   Y   F   C   L
  U60430  ,TRBV7*01             GAG TAT TTC TGT CTG C  #c

#c: rearranged cDNA.


This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: Tuesday, 16-Jun-2020 15:26:45 CEST
Author: Delphine Guiraudou