Alignment of alleles: African clawed frog (Xenopus laevis) TRBV8S2

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                 Q   V   K   V   I   Q   D   Q   K   F   L   A   V   T   L   G   S   S   V   K
  U60436  ,TRBV8S2*01           CAG GTG AAG GTC ATT CAA GAC CAA AAG TTC TTA GCG GTT ACA TTG GGA AGT TCT GTG AAG

                                                        ___________________CDR1-IMGT____________________
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 V   Q   C   S   H   T   G   P   S   Y   Y   A                           M   L
  U60436  ,TRBV8S2*01           GTT CAA TGC AGT CAC ACT GGG CCG AGC TAC TAC GCT ... ... ... ... ... ... ATG CTC

                                                                                            _______________CDR2-
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   Y   Q   Q   K   L   G   Q   G   L   K   L   M   V   L   S   S   D   T
  U60436  ,TRBV8S2*01           TGG TAC CAA CAG AAA CTG GGC CAA GGC CTG AAG CTT ATG GTC CTT TCA TCT GAC ACA ...

                                IMGT________________
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                                     K   P   G   N   M   E   E   G   F   K   E   W   S   M   E
  U60436  ,TRBV8S2*01           ... ... ... ... ... AAG CCT GGG AAC ATG GAG GAG GGC TTC AAA GAA TGG AGC ATG GAA

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                 R   P   D   T   Q   K   S   D   L   S   I   S   Q   V   G   A   E   H   S   A
  U60436  ,TRBV8S2*01           CGG CCC GAT ACC CAG AAA TCT GAT CTG AGT ATT TCT CAA GTG GGA GCT GAG CAC TCG GCC

                                                __CDR3-IMGT__
                                101 102 103 104 105 106
                                 V   Y   F   C   A   A
  U60436  ,TRBV8S2*01           GTG TAT TTC TGT GCT GCG A  #c

#c: rearranged cDNA.


This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: Tuesday, 16-Jun-2020 15:26:45 CEST
Author: Delphine Guiraudou