Alignment of alleles: African clawed frog (Xenopus laevis) TRBV9

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

N (Asn, asparagine) of potential N-glycosylation sites (NXS/T, where X is different from P), (N-linked glycosylation) is shown is green (site is underlined in CHS and in pages edited before 14/10/2009).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                                                     G   R   L   S   H   P   G   D   N   V   T
  U60431  ,TRBV9*01 (1)                                             GGC CGC CTG TCT CAC CCC GGG GAC AAT GTG ACT

                                                        ___________________CDR1-IMGT____________________
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 V   Q   C   E   H   N   D   G   S   Y   T   R                           K   Y
  U60431  ,TRBV9*01 (1)         GTA CAG TGT GAG CAC AAT GAC GGC AGC TAC ACC AGA ... ... ... ... ... ... AAA TAC

                                                                                            _______________CDR2-
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   Y   R   Q   R   T   T   G   P   L   H   P   G   I   N   L   H   H   P   G
  U60431  ,TRBV9*01 (1)         TGG TAC CGA CAG AGA ACA ACC GGG CCC CTA CAT CCT GGG ATC AAC CTA CAC CAC CCA GGA

                                IMGT________________
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                 A                   T   V   E   K   D   F   V   G   G    R   I   I   I   Q   H
  U60431  ,TRBV9*01 (1)         GCA ... ... ... ... ACT GTG GAG AAG GAC TTT GTT GGG GGC AGA ATA ATT ATC CAG CAC

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                 K   T   A   Q   G   A   R   V   L   I   I   L   R   V   S   P   Q   D   S   A
  U60431  ,TRBV9*01 (1)         AAA ACT GCT CAG GGG GCA CGT GTT CTG ATA ATC CTC CGT GTC TCC CCC CAA GAT AGT GCC

                                                ___CDR3-IMGT____
                                101 102 103 104 105 106 107
                                 L   Y   Y   C   A   S   S
  U60431  ,TRBV9*01 (1)         CTG TAT TAC TGT GCC AGC AGC AT  #c
#c: rearranged cDNA.

IMGT note:
(1) Partial V-REGION: AA 1 to 9 are missing.

This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: Friday, 22-Sep-2023 18:30:39 CEST
Author: Delphine Guiraudou