Nucleotide sequences with gaps
The FASTA header contains:
IMGT accession number | gene and allele name | species | functionality | exon name | domain name | domain type | alternative splicing (if it is) | partial (if it is)
>U39456|B7A2*01|Mus musculus|F|EX1|
atggccaaaactatccggagactctcggtggcctttttgacactctcag
>U39457|B7A2*01|Mus musculus|F|EX2|
acaggggaccccattataagatcctcctacctctacctcacaagggctggactccaggcc
tgacccacaatgcctctctctactgtgcctcgatcattttaaaaaa
>U39461|B7A2*01|Mus musculus|F|EX6|[D1]|V-LIKE|
caccatgggcttggcaatccttatctttgtgacagtcttgctgatctcag
>U39462|B7A2*01|Mus musculus|F|EX7|[D1]|V-LIKE|
.atgctgtttccgtggagacgcaagcttatttcaatgggactgcatatctgccgtgccca
tttacaaaggctcaaaacataagc...ctgagtgagctggtagtattttggcaggaccag
............caaaagttggttctgtacgagcactatttg............ggcaca
gagaaacttgatagtgtgaatgccaagtacctgggccgcacgagctttgacaggaac...
...aactggactctacgacttcacaatgttcagatcaaggacatgggctcgtatgattgt
tttatacaaaaaaagccacccacaggatcaattatcctccaacagacattaacagaactg
tcagtgatcg
>U39463|B7A2*01|Mus musculus|F|EX8|[D2]|C-LIKE|
.ccaacttcagtgaacctgaaataaaactggctcagaatgtaacagga......aattct
ggcataaatttgacctgcacgtctaagcaaggtcacccg......aaacctaagaagatg
tattttctgataactaattcaactaatgagtatggtgataacatgcagatatcacaagat
aatgtc....................................acagaactgttcagtatc
tccaacagcctctctctttcattcccggatggtgtgtggcatatgaccgttgtgtgtgtt
ctggaaacggag........................tcaatgaagatttcctccaaacct
ctcaatttca
>U39464|B7A2*01|Mus musculus|F|EX9|
ctcaagagtttccatctcctcaaacgtattggaaggagattacagcttcagttactgtgg
ccctcctccttgtgatgctgctcatcattgtatgtcacaagaagccgaatcagcctagca
g
>U39465|B7A2*01|Mus musculus|F|EX10|
gcccagcaacacagcctctaagttagagcgggatagtaacgctgacagagagactatcaa
cctgaaggaacttgaaccccaaattgcttcagca
>U39466|B7A2*01|Mus musculus|F|EX11|
aaaccaaatgcagag
>U39460|B7A2*01|Mus musculus|F|EX5|
atgtatgtcatcaagacatgtgcaacctg
>U39461|B7A2*01|Mus musculus|F|EX6|[D1]|V-LIKE|
caccatgggcttggcaatccttatctttgtgacagtcttgctgatctcag
>U39462|B7A2*01|Mus musculus|F|EX7|[D1]|V-LIKE|
.atgctgtttccgtggagacgcaagcttatttcaatgggactgcatatctgccgtgccca
tttacaaaggctcaaaacataagc...ctgagtgagctggtagtattttggcaggaccag
............caaaagttggttctgtacgagcactatttg............ggcaca
gagaaacttgatagtgtgaatgccaagtacctgggccgcacgagctttgacaggaac...
...aactggactctacgacttcacaatgttcagatcaaggacatgggctcgtatgattgt
tttatacaaaaaaagccacccacaggatcaattatcctccaacagacattaacagaactg
tcagtgatcg
>U39463|B7A2*01|Mus musculus|F|EX8|[D2]|C-LIKE|
.ccaacttcagtgaacctgaaataaaactggctcagaatgtaacagga......aattct
ggcataaatttgacctgcacgtctaagcaaggtcacccg......aaacctaagaagatg
tattttctgataactaattcaactaatgagtatggtgataacatgcagatatcacaagat
aatgtc....................................acagaactgttcagtatc
tccaacagcctctctctttcattcccggatggtgtgtggcatatgaccgttgtgtgtgtt
ctggaaacggag........................tcaatgaagatttcctccaaacct
ctcaatttca
>U39464|B7A2*01|Mus musculus|F|EX9|
ctcaagagtttccatctcctcaaacgtattggaaggagattacagcttcagttactgtgg
ccctcctccttgtgatgctgctcatcattgtatgtcacaagaagccgaatcagcctagca
g
>U39465|B7A2*01|Mus musculus|F|EX10|
gcccagcaacacagcctctaagttagagcgggatagtaacgctgacagagagactatcaa
cctgaaggaacttgaaccccaaattgcttcagca
>U39466|B7A2*01|Mus musculus|F|EX11|
aaaccaaatgcagag
>U39460|B7A2*01|Mus musculus|F|EX4|
atggaccccagatg
>U39461|B7A2*01|Mus musculus|F|EX6|[D1]|V-LIKE|
caccatgggcttggcaatccttatctttgtgacagtcttgctgatctcag
>U39462|B7A2*01|Mus musculus|F|EX7|[D1]|V-LIKE|
.atgctgtttccgtggagacgcaagcttatttcaatgggactgcatatctgccgtgccca
tttacaaaggctcaaaacataagc...ctgagtgagctggtagtattttggcaggaccag
............caaaagttggttctgtacgagcactatttg............ggcaca
gagaaacttgatagtgtgaatgccaagtacctgggccgcacgagctttgacaggaac...
...aactggactctacgacttcacaatgttcagatcaaggacatgggctcgtatgattgt
tttatacaaaaaaagccacccacaggatcaattatcctccaacagacattaacagaactg
tcagtgatcg
>U39463|B7A2*01|Mus musculus|F|EX8|[D2]|C-LIKE|
.ccaacttcagtgaacctgaaataaaactggctcagaatgtaacagga......aattct
ggcataaatttgacctgcacgtctaagcaaggtcacccg......aaacctaagaagatg
tattttctgataactaattcaactaatgagtatggtgataacatgcagatatcacaagat
aatgtc....................................acagaactgttcagtatc
tccaacagcctctctctttcattcccggatggtgtgtggcatatgaccgttgtgtgtgtt
ctggaaacggag........................tcaatgaagatttcctccaaacct
ctcaatttca
>U39464|B7A2*01|Mus musculus|F|EX9|
ctcaagagtttccatctcctcaaacgtattggaaggagattacagcttcagttactgtgg
ccctcctccttgtgatgctgctcatcattgtatgtcacaagaagccgaatcagcctagca
g
>U39465|B7A2*01|Mus musculus|F|EX10|
gcccagcaacacagcctctaagttagagcgggatagtaacgctgacagagagactatcaa
cctgaaggaacttgaaccccaaattgcttcagca
>U39466|B7A2*01|Mus musculus|F|EX11|
aaaccaaatgcagag
>AK172548|B7A2*02|Mus musculus|F|EX4|
atggaccccagatg
>AK172548|B7A2*02|Mus musculus|F|EX6|[D1]|V-LIKE|
caccatgggcttggcaatccttatctttgtgacagtcttgctgatctcag
>AK172548|B7A2*02|Mus musculus|F|EX7|[D1]|V-LIKE|
.atgctgtttccgtggagacgcaagcttatttcaatgggactgcatatctgccgtgccca
tttacaaaggctcaaaacataagc...ctgagtgagctggtagtattttggcaggaccag
............caaaagttggttctgtacgagcactatttg............ggcaca
gagaaacttgatagtgtgaatgccaagtacctgggccgcacgagctttgacaggaac...
...aactggactctacgacttcacaatgttcagatcaaggacatgggctcgtatgattgt
tttatacaaaaaaagccacccacaggatcaattatcctccaacagacattaacagaactg
tcagtgatcg
>AK172548|B7A2*02|Mus musculus|F|EX8|[D2]|C-LIKE|
.ccaacttcagtgaacctgaaataaaactggctcagaatgtaacagga......aattct
ggcataaatttgacctgcacgtctaggcaaggtcacccg......aaacctaagaagatg
tattttctgataactaattcaactaatgagtatggtgataacatgcagatatcacaagat
aatgtc....................................acagaactgttcagtatc
tccaacagcctctctctttcattcccggatggtgtgtggcatatgaccgttgtgtgtgtt
ctggaaacggag........................tcaatgaagatttcctccaaacct
ctcaatttca
>AK172548|B7A2*02|Mus musculus|F|EX9|
ctcaagagtttccatctcctcaaacgtattggaaggagattacagcttcagttactgtgg
ccctcctccttgtgatgctgctcatcattgtatgtcacaagaagccgaatcagcctagca
g
>AK172548|B7A2*02|Mus musculus|F|EX10|
gcccagcaacacagcctctaagttagagcgggatagtaacgctgacagagagactatcaa
cctgaaggaacttgaaccccaaattgcttcagca
>AK172548|B7A2*02|Mus musculus|F|EX11|
aaaccaaatgcagag
>AK170054|B7A2*03|Mus musculus|F|EX4|
atggaccccagatg
>AK170054|B7A2*03|Mus musculus|F|EX6|[D1]|V-LIKE|
caccatgggcttggcaatccttatctttgtgacagtcttgctgatctcag
>AK170054|B7A2*03|Mus musculus|F|EX7|[D1]|V-LIKE|
.atgctgtttccgtggagacgcaagcttatttcaatgggactgcatatctgccgtgccca
tttacaaaggctcaaaacataagc...ctgagtgagctggtagtattttggcaggaccag
............caaaagttggttctgtacgagcactatttg............ggcaca
gagaaacttgatagtgtgaatgccaagtacctgggccgcacgagctttgacaggaac...
...aactggactctacgacttcacaatgttcagatcaaggacatgggctcgtatgattgt
tttatacaaaaaaagccacccacaggatcaattatcctccaacagacattaacagaactg
tcagtgatcg
>AK170054|B7A2*03|Mus musculus|F|EX8|[D2]|C-LIKE|
.ccaacttcagtgaacctgaaataaaactggctcagaatgtaacagga......aattct
ggcataaatttgacctgcacgtctaagcaaggtcacccg......aaacctaagaagatg
tattttctgataactaattcaactaatgagtatggtgataacatgcagatatcacaagat
aatgtc....................................acagaactgttcagtatc
tccaacagcctctctctttcattcccggatgatgtgtggcatatgaccgttgtgtgtgtt
ctggaaacggag........................tcaatgaagatttcctccaaacct
ctcaatttca
>AK170054|B7A2*03|Mus musculus|F|EX9|
ctcaagagtttccatctcctcaaacgtattggaaggagattacagcttcagttactgtgg
ccctcctccttgtgatgctgctcatcattgtatgtcacaagaagccgaatcagcctagca
g
>AK170054|B7A2*03|Mus musculus|F|EX10|
gcccagcaacacagcctctaagttagagcgggatagtaacgctgacagagagactatcaa
cctgaaggaacttgaaccccaaattgcttcagca
>AK170054|B7A2*03|Mus musculus|F|EX11|
aaaccaaatgcagag
>BC013807|B7A2*04|Mus musculus|F|EX4|
atggaccccagatg
>BC013807|B7A2*04|Mus musculus|F|EX6|[D1]|V-LIKE|
caccatgggcttggcaatccttatctttgtgacagtcttgctgatctcag
>BC013807|B7A2*04|Mus musculus|F|EX7|[D1]|V-LIKE|
.atgctgtttccgtggagacgcaagcttatttcaatgggactgcatatctgccgtgccca
tttacaaaggctcaaaacataagc...ctgagtgagctggtagtattttggcaggaccag
............caaaagttggttctgtacgagcactatttg............ggcaca
gagaaacttgatagtgtgaatgccaagtacctgggccgcacgagctttgacaggaac...
...aactggactctacgacttcacaatgttcagatcaaggacatgggctcgtatgattgt
tttatacaaaaaaagccacccacaggatcaattatcctccaacagacattaacagaactg
tcagtgatcg
>BC013807|B7A2*04|Mus musculus|F|EX8|[D2]|C-LIKE|
.ccaacttcagtgaacctgaaataaaactggctcagaatgtaacagga......aattct
ggcataaatttgacctgcacgtctaggcaaggtcacccg......aaacctaagaagatg
tattttctgataactaattcaactaatgagtatggtgataacatgcagatatcacaagat
aatgtc....................................acagaactgttcagtatc
tccaacagcctctctctttcattcccggatggtgtgtggcatatgaccgttgtgtgtgtt
ctggaaacggag........................tcaatgaagatttcctccaaacct
ctcaatttca
>BC013807|B7A2*04|Mus musculus|F|EX9|
ctcaagagtttccatctcctcaaacgtattggaaggagattacagcttcagttactgtgg
ccctcctccttgtgatgctgctcatcattgtatgtcacaagaagccgaatcagcctagca
g
>BC013807|B7A2*04|Mus musculus|F|EX10|
gcccagcaacacagcctctaagttagagcgggatagtaacgctgacagagagactatcaa
cctgaaggaacttgaaccccaaattgcttcagca
>BC013807|B7A2*04|Mus musculus|F|EX11|
aaaccaaatgcagag