IMGT Repertoire (RPI)
IMGT reference sequences in FASTA format:
Nucleotide sequences with gaps
The FASTA header contains:
IMGT accession number | gene and allele name | species | functionality | exon name | domain name | domain type | alternative splicing (if it is) | partial (if it is)
IMGT accession number | gene and allele name | species | functionality | exon name | domain name | domain type | alternative splicing (if it is) | partial (if it is)
>AK007741|CD48*01|Mus musculus|F|EX1|[D1]|V-LIKE| atgtgcttcataaaacagggatggtgtctggtcctggaactgctactgctgcccttggga actggatttcaag >AK007741|CD48*01|Mus musculus|F|EX2|[D1]|V-LIKE| gtcattcaataccagatataaatgccaccaccggcagcaatgtaaccctgaaaatccata aggacccacttggacca...............tataaacgtatcacctggcttcatact. ...........aaaaatcagaagattttagagtacaactat...............aata gtacaaagacaatcttcgagtctgaa......tttaaaggcagggtttatcttgaagaaa acaatggtgcacttcatatctctaatgtccggaaagaggacaaaggtacctactacatga gagtgctgcgt...............gaaactgagaacgagttgaagataaccctggaag tatttg >AK007741|CD48*01|Mus musculus|F|EX3|[D2]|C-LIKE| .........................atcctgtgcccaagccttccatagaaatcaataag actgaagcgtcgactgattcctgtcacctgaggctatcgtgtgaggtaaaggaccagcat ...............gttgactatacttggtatgagagctcgggacctttccccaaa... ..................aagagtccaggatat........................... ..................gtgctcgatctcatcgtcacaccacag......aacaagtct acattttacacctgccaagtcagcaatcct............gtaagcagcaagaacgac acagtgtacttcactctaccttgtgatctag >AK007741|CD48*01|Mus musculus|F|EX4| ccagatcttctggagtatgttggactgcaacttggctagtggtcacaacactcatcattc acaggatcctgttaacc >BC060977|CD48*02|Mus musculus|F|EX1|[D1]|V-LIKE| atgtgcttcataagacagggatggtgtctggtcctggaactgctactgctgcccttggga actggatttcaag >BC060977|CD48*02|Mus musculus|F|EX2|[D1]|V-LIKE| gtcattcaataccagatataaatgccaccaccggcagcaatgtaaccctgaaaatccata aggacccacttggacca...............tataaacgtatcacctggcttcatact. ...........aaaaatcagaagattttagagtacaactat...............aata gtacaaagacaatcttcgagtctgaa......tttaaaggcagggtttatcttgaagaaa acaatggtgcacttcatatctctaatgtccggaaagaggacaaaggtacctactacatga gagtgctgcgt...............gaaactgagaacgagttgaagataaccctggaag tatttg >BC060977|CD48*02|Mus musculus|F|EX3|[D2]|C-LIKE| .........................atcctgtgcccaagccttccatagaaatcaataag actgaagcgtcgactgattcctgtcacctgaggctatcgtgtgaggtaaaggaccagcat ...............gttgactatacttggtatgagagctcgggacctttccccaaa... ..................aagagtccaggatat........................... ..................gtgctcgatctcatcgtcacaccacag......aacaagtct acattttacacctgccaagtcagcaatcct............gtaagcagcaagaacgac acagtgtacttcactctaccttgtgatctag >BC060977|CD48*02|Mus musculus|F|EX4| ccagatcttctggagtatgttggactgcaacttggctagtggtcacaacactcatcattc acaggatcctgttaacc >AB196821|CD48*03|Mus musculus|F|EX1|[D1]|V-LIKE| atgtgcttcataaaacagggatggtgtctggtcctggaactgctactgctgcccttggga actggatttcaag >AB196821|CD48*03|Mus musculus|F|EX2|[D1]|V-LIKE| gtcattcaataccagatataaatgccaccaccggcagcaatgtaaccctgaaaatccata aggacccacttggacca...............tataaacgtatcacctggcttcatact. ...........aaaaatcagaagattttagagtacaactat...............aata gtacaaagacaatcttcgagtctgaa......tttaaaggcagggtttatcttgaagaaa acgatggtgcacttcatatctctaatgtccggaaagaggacaaaggtacctactacatga gagtgctgcgt...............gaaactgagaacgagttgaagataaccctggaag tatttg >AB196821|CD48*03|Mus musculus|F|EX3|[D2]|C-LIKE| .........................atcctgtgcccaagccttccatagaaatcaataag actgaagcgtcgactgattcctgtcacctgaggctatcgtgtgaggtaaaggaccagcat ...............gttgactatacttggtatgagagctcgggacctttccccaaa... ..................aagagtccaggatat........................... ..................gtgctcgatctcatcgtcacaccacag......aacaagtct acattttacacctgccaagtcagcaatcct............gtaagcagcaagaacgac acagtgtacttcactctaccttgtgatctag >AB196821|CD48*03|Mus musculus|F|EX4| ccagatcttctggagtatgttggactgcaacttggctagtggtcacaacactcatcattc acaggatcctgttaacc >AK146173|CD48*04|Mus musculus|F|EX1|[D1]|V-LIKE| atgtgcttcagaaaacagggatggtgtctggtcctggaactgctactgctgcccttggga actggatttcaag >AK146173|CD48*04|Mus musculus|F|EX2|[D1]|V-LIKE| gtcattcaataccagatataaatgccaccaccggcagcaatgtaaccctgaaaatccata aggaccaacttggacca...............tataaacgtatcacctggcttcatact. ...........aaaaatcagaagattttagagtacaactat...............aata gtacaaagacaatcttcgagtctgaa......tttaaaggcagggtttatcttgaagaaa acgatggtgcacttcatatctctaatgtccggaaagaggacaaaggtacctactacatga gagtgctgcgt...............gaaactgagaacgagttgaagataaccctggaag tatttg >AK146173|CD48*04|Mus musculus|F|EX3|[D2]|C-LIKE| .........................atcctgtgcccaagccttccatagaaatcaataag actgaagcgtcgactgattcctgtcacctgaggctatcgtgtgaggtaaaggaccagcat ...............gttgactatacttggtatgagagctcgggacctttccccaaa... ..................aagagtccaggatat........................... ..................gtgctcgatctcatcgtcacaccacag......aacaagtct acattttacacctgccaagtcagcaatcct............gtaagcagcaagaacgac acagtgtacttcactctaccttgtgatctag >AK146173|CD48*04|Mus musculus|F|EX4| ccagatcttctggagtatgttggactgcaacttggctagtggtcacaacactcatcattc acaggatcctgttaacc >AK088027|CD48*05|Mus musculus|F|EX1|[D1]|V-LIKE|Splicing B| atgtgcttcagaaaacagggatggtgtctggtcctggaactgctactgctgcccttggga actggatttcaag >AK088027|CD48*05|Mus musculus|F|EX2|[D1]|V-LIKE|Splicing B| gtcattcaataccagatataaatgccaccaccggcagcaatgtaaccctgaaaatccata aggacccacttggacca...............tataaacgtatcacctggcttcatact. ...........aaaaatcagaagattttagagtacaactat...............aata gtacaaagacaatcttcgagtctgaa......tttaaaggcagggtttatcttgaagaaa acaatggtgcacttcatatctctaatgtccggaaagaggacaaaggtacctactacatga gagtgctgcgt...............gaaactgagaacgagttgaagataaccctggaag tatttg >AK088027|CD48*05|Mus musculus|F|EX4|Splicing B| ccagatcttctggagtatgttggactgcaacttggctagtggtcacaacactcatcattc acaggatcctgttaacc
Created: 23/05/2007
Last updated: Friday, 22-Sep-2023 18:32:07 CEST
Author: Phani vijay Garapati and Marie-Paule Lefranc
Editor: Chantal Ginestoux
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