IMGT Repertoire (RPI)
IMGT reference sequences in FASTA format:
Nucleotide sequences with gaps
The FASTA header contains:
IMGT accession number | gene and allele name | species | functionality | exon name | domain name | domain type | alternative splicing (if it is) | partial (if it is)
IMGT accession number | gene and allele name | species | functionality | exon name | domain name | domain type | alternative splicing (if it is) | partial (if it is)
>AF164519|SLAM*01|Mus musculus|F|EX1| atggatcccaaaggatccctttcctggagaatacttctgtttctctccctggcttttgag ttgagctacggaacag >AF164520|SLAM*01|Mus musculus|F|EX2|[D1]|V-LIKE| ....gtggaggtgtgatggattgcccagtgattctccagaagctgggacaggacacgtgg ctgcccctgacgaatgaacatcagataaataagagcgtgaacaaaagtgtccgcatcctc gtcaccatggcgacgtccccaggaagcaaatccaacaagaaaattgtgtctttt...... ......gatctctctaaagggagctatccagatcacctg.........gaggatggctac cactttcaatcaaaaaacctgagcctgaagatcctcgggaacaggcgggagagtgaagga tggtacttggtgagcgtggaggagaac............gtttctgttcagcaattctgc aagcagctgaagctttatg >AF164520|SLAM*01|Mus musculus|F|EX3|[D2]|C-LIKE| ...................aacaggtctcccctccagagattaaagtgctaaacaaaacc caggagaacgagaatgggacctgcagcttgctgttggcctgcacagtgaagaaaggggac ............catgtgacttacagctggagtgatgaggcaggcacccac......... ...ctgctgagccgagccaaccgc.................................... ............tcccacctcctgcacatcactcttagcaaccag......catcaagac agcatctacaactgcaccgcaagcaaccct............gtcagcagtatctctagg accttcaacctatcatcgcaagcatgcaagcaggaatcctcctcag >AF164521|SLAM*01|Mus musculus|F|EX4| aatcgagtccatggatgcaatatactcttgtaccactgggggtcgttataatcttcatcc tggttttcacggcaataataatgatgaaaagacaag >AF164522|SLAM*01|Mus musculus|F|EX5| gtaaatcaaatcactgccagccaccagtggaagaaaaaagccttactatttatgcccaag tacagaaatcaggg >AF164523|SLAM*01|Mus musculus|F|EX6| cctcaagagaagaaacttcatgatgccctaacagatcaggacccctgcacaaccatttat gtggctgccacagagcctgccccagagtctgtccag >AF164523|SLAM*01|Mus musculus|F|EX7| gaaccaaaccccaccacagtttatgccagtgtgacactgccagagagc >AK036429|SLAM*02|Mus musculus|F|EX1| atggatcccaaaggatccctttcctggagaatacttctgtttctctccctggcttttgag ttgagctacggaacag >AK036429|SLAM*02|Mus musculus|F|EX2|[D1]|V-LIKE| ....gtggaggtgtgatggattgcccagtgattctccagaagctgggacaggacacgtgg ctgcccctgacgaatgaacatcagataaataagagcgtgaacaaaagtgtccgcatcctc gtcaccatggcgacgtccccaggtagcaaatccaacaagaaaattgtgtctttt...... ......gatctctctaaagggagctatccagatcacctg.........gaggatggctac cactttcaatcaaaaaacctgagcctgaagatcctcgggaacaggcgggagagtgaagga tggtacttggtgagcgtggaggagaac............gtttctgttcagcaattctgc aagcagctgaagctttatg >AK036429|SLAM*02|Mus musculus|F|EX3|[D2]|C-LIKE| ...................aacaggtctcccctccagagattaaagtgctaaacaaaacc caggagaacgagaatgggacctgcagcttgctgttggcctgcacagtgaagaaaggggac ............catgtgacttacagctggagtgatgaggcaggcacccac......... ...ctgctgagccgagccaaccgc.................................... ............tcccacctcctgcacatcactcttagcaaccag......catcaagac agcatctacaactgcaccgcaagcaaccct............gtcagcagtatctctagg accttcaacctatcatcgcaagcatgcaagcaggaatcctcctcag >AK036429|SLAM*02|Mus musculus|F|EX4| aatcgagtccatggatgcaatatactcttgtaccactgggggtcgttataatcttcatcc tggttttcacggcaataataatgatgaaaagacaag >AK036429|SLAM*02|Mus musculus|F|EX5| gtaaatcaaatcactgccagccaccagtggaagaaaaaagccttactatttatgcccaag tacagaaatcaggg >AK036429|SLAM*02|Mus musculus|F|EX6| cctcaagagaagaaacttcatgatgccctaacagatcaggacccctgcacaaccatttat gtggctgccacagagcctgccccagagtctgtccag >AK036429|SLAM*02|Mus musculus|F|EX7| gaaccaaaccccaccacagtttatgccagtgtgacactgccagagagc >AK016818|SLAM*03|Mus musculus|F|EX2|[D1]|V-LIKE| gaaattgtttctttt............gatctctctaaagggagctatccagatcacctg .........gaggatggctaccactttcaatcaaaaaacctgagcctgaagatcctcggg aacaggcgggagagtgaaggatggtacttggtgagcgtggaggagaac............ gtttctgttcagcaattctgcaagcagctgaagctttatg >AK016818|SLAM*03|Mus musculus|F|EX3|[D2]|C-LIKE| ...................aacaggtctcccctccagagattaaagtgctaaacaaaacc caggagaacgagaatgggacctgcagcttgctgttggcctgcacagtgaagaaaggggac ............catgtgacttacagctggagtgatgaggcaggcacccac......... ...ctgctgagccgagccaaccgc.................................... ............tcccacctcctgcacatcactcttagcaaccag......catcaagac agcatctacaactgcaccgcaagcaaccct............gtcagcagtatctctagg accttcaacctatcatcgcaagcatgcaagcaggaatcctcctcag >AK016818|SLAM*03|Mus musculus|F|EX4| aatcgagtccatggatgcaatatactcttgtaccactgggggtcgttataatcttcatcc tggttttcacggcaataataatgatgaaaagacaag >AK016818|SLAM*03|Mus musculus|F|EX5| gtaaatcaaatcactgccagccaccagtggaagaaaaaagccttactatttatgcccaag tacagaaatcaggg >AK016818|SLAM*03|Mus musculus|F|EX6| cctcaagagaagaaacttcatgatgccctaacagatcaggacccctgcacaaccatttat gtggctgccacagagcctgccccagagtctgtccag >AK016818|SLAM*03|Mus musculus|F|EX7| gaaccaaaccccaccacagtttatgccagtgtgacactgccagagagc >AF149791|SLAM*04|Mus musculus|F|EX1| atggatcccaaaggatccctttcctggagaatacttctgtttctctccctggcttttgag ttgagctacggaacag >AF149791|SLAM*04|Mus musculus|F|EX2|[D1]|V-LIKE| ....gtggaggtgtgatggattgcccagtgattctccagaagctgggacaggacacgtgg ctgcccctgacgaatgaacatcagataaataagagcgtgaacaaaagtgtccgcatcctc gtcaccatggcgacgtccccaggaagcaaatccaacaagaaaattgtgtctttt...... ......gatctctctaaagggagctatccagatcacctg.........gaggatggctac cactttcaatcgaaaaacctgagcctgaagatcctcgggaacaggcgggagagtgaagga tggtacttggtgagcgtggaggagaac............gtttctgttcagcaattctgc aagcagctgaagctttatg >AF149791|SLAM*04|Mus musculus|F|EX3|[D2]|C-LIKE| ...................aacaggtctcccctccagagattaaagtgctaaacaaaacc caggagaacgagaatgggacctgcagcttgctgttggcctgcacagtgaagaaaggggac ............catgtgacttacagctggagtgatgaggcaggcacccac......... ...ctgctgagccgagccaaccgc.................................... ............tcccacctcctgcacatcactcttagcaaccag......catcaagac agcatctacaactgcaccgcaagcaaccct............gtcagcagtatctctagg accttcaacctatcatcgcaagcatgcaagcaggaatcctcctcag >AF149791|SLAM*04|Mus musculus|F|EX4| aatcgagtccatggatgcaatatactcttgtaccactgggggtcgttataatcttcatcc tggttttcacggcaataataatgatgaaaagacaag >AF149791|SLAM*04|Mus musculus|F|EX5| gtaaatcaaatcactgccagccaccagtggaagaaaaaagccttactatttatgcccaag tacagaaatcaggg >AF149791|SLAM*04|Mus musculus|F|EX6| cctcaagagaagaaacttcatgatgccctaacagatcaggacccctgcacaaccatttat gtggctgccacagagcctgccccagagtctgtccag >AF149791|SLAM*04|Mus musculus|F|EX7| gaaccaaaccccaccacagtttatgccagtgtgacactgccagagagc >AK172138|SLAM*05|Mus musculus|F|EX1| atggatcccaaaggatccctttcctggagaatacttctgtttctctccctggcttttgag ttgagctacggaacag >AK172138|SLAM*05|Mus musculus|F|EX2|[D1]|V-LIKE| ....gtggaggtgtgatggattgcccagtgattctccagaagctgggacaggacacgtgg ctgcccctgacgaatgaacatcagataaataagagcgtgaacaaaagtgtccgcatcctc gtcaccatggcgacgtccccaggaagcaaatccaacaagaaaattgtgtctttt...... ......gatctctctaaagggagctatccagatcacctg.........gaggatggctac cactttcaatcgaaaaacctgagcctgaagatcctcgggaacaggcgggagagtgaagga tggtacttggtgagcgtggaggagaac............gtttctgttcagcaattctgc aagcagctgaagctttatg >AK172138|SLAM*05|Mus musculus|F|EX3|[D2]|C-LIKE| ...................aacaggtctcccctccagagattaaagtgctaaacaaaacc caggagaacgagaatgggacctgcagcttgctgttggcctgcacagtgaagaaaggggac ............catgtgacttacagctggagtgatgaggcaggcacccac......... ...ctgctgagccgagccaaccgc.................................... ............tcccacctcctgcacatcactcttagcaaccag......catcaagac agcatctacaactgcaccgcaagcaaccct............gtcagcagtatctctagg accttcaacctatcatcgcaagcatgcaagcaggaatcctcctcag >AK172138|SLAM*05|Mus musculus|F|EX4| aatcgagtccatggatgcaatatactcttgtaccactgggggtcgttataatcttcatcc tggttttcacggcaataataatgatgaaaagacaag >AK172138|SLAM*05|Mus musculus|F|EX5| gtaaatcaaatcactgccagccaccagtggaagaaagaagccttactatttatgcccaag tacagaaatcaggg >AK172138|SLAM*05|Mus musculus|F|EX6| cctcaagagaagaaacttcatgatgccctaacagatcaggacccctgcacaaccatttat gtggctgccacagagcctgccccagagtctgtccag >AK172138|SLAM*05|Mus musculus|F|EX7| gaaccaaaccccaccacagtttatgccagtgtgacactgccagagagc >AB196798|SLAM*06|Mus musculus|F|EX1| atggatcccaaaggatccctttcctggagaatacttctgtttctctccctggcttttgag ttgagctacggaacag >AB196798|SLAM*06|Mus musculus|F|EX2|[D1]|V-LIKE| ....gtggaggtgtgatggattgcccagtgattctccagaagctgggacaggacacgtgg ctgcccctgacgaatgaacatcagataaataagagcgtgaacaaaagtgtccgcatcctc gtcaccatggcgacgtccccaggaagcaaatccaacaagaaaattgtgtctttt...... ......gatctctctaaagggagctatccagatcacctg.........gaggatggctac cactttcaatcgaaaaacctgagcctgaagatcctcgggaacaggcgggagagtgaagga tggtacttggtgagcgtggaggagaac............gtttctgttcagcaattctgc aagcagctgaagctttatg >AB196798|SLAM*06|Mus musculus|F|EX3|[D2]|C-LIKE| ...................aacaggtctcccctccagagattaaagtgctaaacaaaacc caggagaacgagaatgggacctgcagcttgctgttggcctgcacagtgaagaaaggggac ............catgtgacttacagctggagtgatgaggcaggcacccac......... ...ctgctgagccgagccaaccgc.................................... ............tcccacctcctgcacatcactcttagcaaccag......catcaagac agcatctacaactgcaccgcaagcaaccct............gtcagcagtatctctagg accttcaacctatcatcgcaagcatgcaagcaggaatcctcctcag >AB196798|SLAM*06|Mus musculus|F|EX4| aatcgagtccatggatgcaatatactcttgtaccactgggggtcgttataatcttcatcc tagttttcacggcaataataatgatgaaaagacaag >AB196798|SLAM*06|Mus musculus|F|EX5| gtaaatcaaatcactgccagccaccagtggaagaaaaaagccttactatttatgcccaag tacagaaatcaggg >AB196798|SLAM*06|Mus musculus|F|EX6| cctcaagagaagaaacttcatgatgccctaacagatcaggacccctgcacaaccatttat gtggctgccacagagcctgccccagagtctgtccag >AB196798|SLAM*06|Mus musculus|F|EX7| gaaccaaaccccaccacagtttatgccagtgtgacactgccagagagc >AB196797|SLAM*07|Mus musculuc|F|EX1| atggatcccaaaggatccctttcctggagaatacttctgtttctctccctggcttttgag ttgagctacggaacag >AB196797|SLAM*07|Mus musculuc|F|EX2|[D1]|V-LIKE| ....gtggagctgtgatggattgcccagtgattctccagaagttgggacaggacacgtgg ctgcccctgacgaatgaacatcagataaataagagcgtgaacaaaagtgtccgcatcctc gtcaccatggcaacgtccccaggaagcaaatccaacaagaaaattgtgtctttt...... ......gatctctctaaagggagctatccagatcacctg.........gaggatggctac cactttcaatcgaaaaacctgagcctgaagatcctcgggaacaggcgggagagtgaagga tggtacttggtgagcgtggaggagaac............gtgtctgttcagcaattctgc aagcagctgaagctttatg >AB196797|SLAM*07|Mus musculuc|F|EX3|[D2]|C-LIKE| ...................aacaggtctcccctccagagattaaagtgctaaacaaaacc caggagaacgagaatgggacctgcagcttgctgttggcctgcacagtgaagaaaggggac ............catgtgacttacagctggagtgatgaggcaggcacccac......... ...ctgctgagccgagccaaccgc.................................... ............tcccacctcctgcatatcactcttagcaaccag......catcaagac agcatctacaactgcaccgcaagcaaccct............gtcagcagtatctctagg accttcaacctatcatcgcaagcatgcaagcaggaatcctcctcag >AB196797|SLAM*07|Mus musculuc|F|EX4| aatcgagtccatggatgcaatatactcttgtaccactgggggtcgttataatcttcatcc tagttttcacggcaataataatgatgaaaagacaag >AB196797|SLAM*07|Mus musculuc|F|EX5| gtaaaccaaatcactgccagccaccagtggaagaaaaaagccttactatttatgcccaag tacagaaatcaggg >AB196797|SLAM*07|Mus musculuc|F|EX6| cctcaagagaagaaacttcatgatgccctaacagatcaggacccctgcacaaccatttat gtggctgccacagagcctgccccagagtctgtccag >AB196797|SLAM*07|Mus musculuc|F|EX7| gaaccaaaccccaccacagtttatgccagtgtgacactgccagagagc
Created: 23/05/2007
Last updated: Friday, 22-Sep-2023 18:32:07 CEST
Author: Phani Vijay Garapati and Marie-Paule Lefranc
Editor: Chantal Ginestoux
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