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IMGT reference sequences in FASTA format:

Nucleotide sequences with gaps

The FASTA header contains:
IMGT accession number | gene and allele name | species | functionality | exon name | domain name | domain type | alternative splicing (if it is) | partial (if it is) 
>AF248636|SLAMF6*01|Mus musculus|F|EX1|
atggctgtctcaagggctccagcacccgactccgcctgtcagaggatggtctggctcttt
ccacttgtcttctgcctcggctcag
>AF248636|SLAMF6*01|Mus musculus|F|EX2|[D1]|V-LIKE|
....ggagtgaagtttcacagagcagctcagacccccagctaatgaatggcgttctagga
gagtctgcagttcttcctctaaagcttcctgca...gggaagatagccaatatcatcatc
tggaattatgaatgggaagcgtcacaagtcactgccctcgttatcaacctaagtaat...
......cctgaaagtccacaaatcatgaacactgat............gtaaagaagaga
ctgaacatcacccagtcctactccctgcaaatcagcaaccttaccatggcagacacagga
tcatacactgcgcagataaccacaaaggac.........tctgaagtgatcaccttcaaa
tatattctgagggtctttg
>AF248636|SLAMF6*01|Mus musculus|F|EX3|[D2]|C-LIKE|
.................................aacgattgggtaacttagaaactacca
actatact.........ctcctgctagagaatgggacctgccagatacacctggcctgtg
ttttg...aagaatcaaagtcaaactgtctcagttgagtggcaagccacagga.......
..aacatctctttaggaggacca.....................................
...........aatgtcactatcttttgggacccgaggaattct.........ggtgacc
agacttacgtctgcagagccaagaatgctgtc......agcaatttgtcagtctctgttt
cgacccagagtctctgcaaa
>AF248636|SLAMF6*01|Mus musculus|F|EX4|
gggttctaactaatccaccctggaatgcagtatggtttatgactacaatttcaataatca
gtgcagtcatactcatctttgtgtgctggagcatacatgtttggaagagaagag
>AF248636|SLAMF6*01|Mus musculus|F|EX5|
gttctcttcctttgactagccaacatccag
>AF248636|SLAMF6*01|Mus musculus|F|EX6|
agtcctcccagagcacagatggcccaggctctccagggaacactgtgtatgcacaagtca
ctcgtccaatgcag
>AF248636|SLAMF6*01|Mus musculus|F|EX7|
gaaatgaaaatcccaaaacctatcaaaaatgactccatgacaatttactccatagttaat
cattccagagag
>AF248636|SLAMF6*01|Mus musculus|F|EX8|
gaaacagtggctttaaccggctataaccaacccattaccctgaaggttaacactttaatc
aactataactcctga
>BC030031|SLAMF6*02|Mus musculus|F|EX1|
atggctgtctcaagggctccagcacccgactccgcctgtcagaggatggtctggctcttt
ccacttgtcttctgcctcggctcag
>BC030031|SLAMF6*02|Mus musculus|F|EX2|[D1]|V-LIKE|
....ggagtgaagtttcacagagcagctcagacccccagctaatgaatggcgttctagga
gagtctgcagttcttcctctaaagcttcctgca...gggaagatagccaatatcatcatc
tggaattatgaatgggaagcgtcacaagtcactgccctcgttatcaacctaagtaat...
......cctgaaagtccacaaatcatgaacactgat............gtaaagaagaga
ctgaacatcacccagtcctactccctgcaaatcagcaaccttaccatggcagacacagga
tcatacactgcgcagataaccacaaaggac.........tctgaagtgatcaccttcaaa
tatattctgagggtctttg
>BC030031|SLAMF6*02|Mus musculus|F|EX3|[D2]|C-LIKE|
aacgactgggtaacttagaaactaccaactatactctcctgctagagaatgggacctgcc
agatacacctggcctgtgttttgaagaatcaaagtcaaactgtctcagttgagtggcaag
ccacaggaaacatctctttaggaggaccaaatgtcactatcttttgggacccgaggaatt
ctggtgaccagacttacgtctgcagagccaagaatgctgtcagcaatttgtcagtctctg
tttcaacccagagtctctgcaaag
>BC030031|SLAMF6*02|Mus musculus|F|EX4|
gggttctaactaatccaccctggaatgcagtatggtttatgactacaatttcaataatca
gtgcagtcatactcatctttgtgtgctggagcatacatgtttggaagagaagag
>BC030031|SLAMF6*02|Mus musculus|F|EX5|
gttctcttcctttgactagccaacatccag
>BC030031|SLAMF6*02|Mus musculus|F|EX6|
agtcctcccagagcacagatggcccaggctctccagggaacactgtgtatgcacaagtca
ctcgtccaatgcag
>BC030031|SLAMF6*02|Mus musculus|F|EX7|
gaaatgaaaatcccaaaacctatcaaaaatgactccatgacaatttactccatagttaat
cattccagagag
>BC030031|SLAMF6*02|Mus musculus|F|EX8|
gaaacagtggctttaaccggctataaccaacccattaccctgaaggttaacactttaatc
aactataactcctga
>AB196809|SLAMF6*03|Mus musculus|F|EX1|
atggctgtctcaagggctccagcacccgactccgcctgtcagaggatggtctggctcttt
ccacttgtcttctgcctcggctcag
>AB196809|SLAMF6*03|Mus musculus|F|EX2|[D1]|V-LIKE|
....ggagtgaagtttcacagagcagctcagacccccagctaatgaatggcgttctagga
gagtctgcagttcttcctctaaagcttcctgca...gggaagatagccaatatcatcatc
tggaattatgaatgggaagcgtcacaagtcactgccctcgttatcaacctaagtaat...
......cctgaaagtccacaaatcatgaacactgat............gtaaagaagaga
ctgaacatcacccagtcctactccctgcaaatcagcaaccttaccatggcagacacagga
tcatacactgcgcagataatcacaaaggac.........tctgaagtgatcaccttcaaa
tatattctgagggtctttg
>AB196809|SLAMF6*03|Mus musculus|F|EX3|[D2]|C-LIKE|
.................................aacgactgggtaacttagaaactacca
actatact.........ctcctgctagagaatgggacctgccagatacacctggcctgtg
ttttg...aagaatcaaagtcaaactgtctcagttgagtggcaagccacagga.......
..aacatctctttaggaggacca.....................................
...........aatgtcactatcttttgggacccgaggaattct.........ggtgacc
agacttacgtctgcagagccaagaatgctgtc......agcaatttgtcagtctctgttt
cgacccagagtctctgcaaag
>AB196809|SLAMF6*03|Mus musculus|F|EX4|
gggttctaactaatccaccctggaatgcagtatggtttatgactacaatttcaataatca
gtgcagtcatactcatctttgtgtgctggagcatacatgtttggaagagaagag
>AB196809|SLAMF6*03|Mus musculus|F|EX5|
gttctcttcctttgactagccaacatccag
>AB196809|SLAMF6*03|Mus musculus|F|EX6|
agtcctcccagagcacagatggcccaggctctccagggaacactgtgtatgcacaagtca
ctcgtccaatgcag
>AB196809|SLAMF6*03|Mus musculus|F|EX7|
gaaatgaaaatcccaaaacctatcaaaaatgactccatgacaatttactccatagttaat
cattccagagag
>AB196809|SLAMF6*03|Mus musculus|F|EX8|
gaaacagtggctttaaccggctataaccaacccattaccctgaaggttaacactttaatc
aactataactcctga