FR-IMGT and CDR-IMGT lengths: Ma's night monkey (Aotus nancymaae) TRAV

Only FUNCTIONAL and ORF V-GENEs are shown.

Ma's night monkey (Aotus nancymaae) TRAV subgroup names are according to the human TRAV subgroup names (FR-IMGT and CDR-IMGT lengths: Human TRAV )

TRAV
genes		 FR1-IMGT
1 to 26		 CDR1-IMGT
27 to 38		 FR2-IMGT
39 to 55		 CDR2-IMGT
56 to 65		 FR3-IMGT
66 to 104		 CDR3-IMGT
(germline V-GENE)
105 to 115
(26) (5-7) (17) (5-7) (34-36) (3, 4)
TRAV5   6   6 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (3)*
TRAV9S1   6   6 -6 (aa 72 to 77) +3 (aa 84A,84B,84C) (3)*
TRAV12S1   6   5 -1 (aa 67) -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (3)*
TRAV12S2   6   5 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (3)*
TRAV13S1   6   6 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (3)*
TRAV17   5   6 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (3)*
TRAV19   7   7 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (4)*
TRAV21   6   6 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (3)*
TRAV29   6   6 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (3)*

* Probable CDR3-IMGT length, but needs to be confirmed with germline sequences.

Created: 31/03/2003
Author: Géraldine Folch