Citing IMGT databases: Manso T. et al. IMGT® databases, related tools and web resources through three main axes of research and development. Nucleic Acids Res. 2022 Jan 7;50(D1):D1262-D1272. doi: 10.1093/nar/gkab1136 PMID: 34875068 Free PMC article.
Program version: v. 

Add the possibility to obtain a gene table per strain (for mouse now and for other species later) and allotypes/isotypes for human.
September 25th, 2024.

Bibliographical references in alphabetic order, small design changes and addition of "NL" for non-localized gene.
June 14th, 2024.

Addition of 'Score for IMGT allele confirmation' as well as NCBI TPA accession numbers.
September 20th, 2023.

Implementation of the dynamic gene table.

Gene table legend:

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene, when the data have been confirmed by several studies.

Functionality is shown in parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.

IMGT allele confirmation: a scoring system is employed to signify the frequency of occurrences of a specific allele within sequence data. A single star () indicates that no instances of the allele have been identified in the literature. Two stars () indicate the discovery of one literature sequence containing the allele. If more than one literature sequence is found to contain the allele, it is designated with three stars (). In the Excel file, the stars are represented by the plus symbol (+).

Click on:
  • IMGT gene name to get the corresponding IMGT/GENE-DB entry (link).
  • IMGT allele name to see the corresponding Alignments of alleles (link).
  • Accession number to get the corresponding IMGT/LIGM-DB entry (link).
  • MAP: mapped sequences. Click to access GENE-DB «LOCALIZATION IN GENOME ASSEMBLIES» (link).
  • [number] to access the corresponding IMGT reference (popover).
  • (number) to see the corresponding IMGT note (popover).
Options:
  • You can show/hide columns (), download data () or put the table in fullscreen () using buttons.
See also (IMGT Scientific chart):
Select a species and a IMGT group to get the gene table:
Only IMGT available species/group are shown in the drop-down list.
The gene table can take several seconds to appear, please be patient.
Gene table of Arabian camel (Camelus dromedarius) IGKV IMGT group:
IMGT sub­groupIMGT gene nameIMGT allele nameScore for
IMGT allele
confirmation		FctChromosomosal
localization		R T PrIMGT/LIGM-DB reference sequencesIMGT/LIGM-DB sequences from the literature
Clone namesBreedAccession
numbers		Positions
in the sequence
(L-V-GENE-UNIT)
or V-REGION (*)		Secondary
accession
numbers		Clone namesBreedAccession
numbers		Positions
in the sequence
(L-V-GENE-UNIT)
or V-REGION (*)
IGKV1IGKV1-7 IGKV1-7*01 ORF (1) 28 CM016654.2 African IMGT000061 MAP 112206-112703
IGKV1IGKV1-12 IGKV1-12*01 ORF (2) 28 CM016654.2 African IMGT000061 MAP 95727-96225
IGKV1IGKV1-15 IGKV1-15*01 P (3) 28 CM016654.2 African IMGT000061 MAP 86452-86938
IGKV1IGKV1-20 IGKV1-20*01 P (4) 28 CM016654.2 African IMGT000061 MAP 63595-64121
IGKV1IGKV1-23 IGKV1-23*01 P (5) 28 CM016654.2 African IMGT000061 MAP complement(60795-61303)
IGKV1IGKV1-26 IGKV1-26*01 F 28 CM016654.2 African IMGT000061 MAP 36902-37400
IGKV1IGKV1-29 IGKV1-29*01 F 28 CM016654.2 African IMGT000061 MAP 15347-15929
IGKV2IGKV2-9 IGKV2-9*01 P (6) 28 CM016654.2 African IMGT000061 MAP <107480-107610 *
IGKV2IGKV2-13 IGKV2-13*01 P (7) 28 CM016654.2 African IMGT000061 MAP 95066-95372 *
IGKV2IGKV2-21 IGKV2-21*01 P (8) 28 CM016654.2 African IMGT000061 MAP 62908-63235 *
IGKV2IGKV2-22 IGKV2-22*01 P (9) 28 CM016654.2 African IMGT000061 MAP complement(61666-61970) *
IGKV2IGKV2-28 IGKV2-28*01 F 28 CM016654.2 African IMGT000061 MAP 26587-27400
IGKV2IGKV2-30 IGKV2-30*01 F 28 CM016654.2 African IMGT000061 MAP 10001-10771
IGKV3IGKV3-1 IGKV3-1*01 P (10) 28 CM016654.2 African IMGT000061 MAP complement(133890-134451)
IGKV3IGKV3-3 IGKV3-3*01 P (11) 28 CM016654.2 African IMGT000061 MAP 125006-125397
IGKV4IGKV4-4 IGKV4-4*01 F 28
RTPr
++
 CM016654.2 African IMGT000061 MAP complement(120473-121049)
IGKV4IGKV4-8 IGKV4-8*01 P (12) 28 CM016654.2 African IMGT000061 MAP complement(108721-109277)
IGKV4IGKV4-14 IGKV4-14*01 P (13) 28 CM016654.2 African IMGT000061 MAP complement(92748-93312)
IGKV4IGKV4-25 IGKV4-25*01 P (14) 28 CM016654.2 African IMGT000061 MAP complement(43377-43943)
IGKV5IGKV5-2 IGKV5-2*01 F 28 CM016654.2 African IMGT000061 MAP 128180-128695
IGKV6IGKV6-11 IGKV6-11*01 P (15) 28 CM016654.2 African IMGT000061 MAP 98924-99492
IGKV6IGKV6-19 IGKV6-19*01 P (16) 28 CM016654.2 African IMGT000061 MAP 69821-70109 *
IGKV6IGKV6-19D IGKV6-19D*01 P (16) 28 CM016654.2 African IMGT000061 MAP complement(54847-55135) *
IGKV7IGKV7-5 IGKV7-5*01 P (17) 28 CM016654.2 African IMGT000061 MAP complement(116087-116391) *
IGKV8IGKV8-10 IGKV8-10*01 F 28 CM016654.2 African IMGT000061 MAP 103649-104220
IGKV8IGKV8-18 IGKV8-18*01 P (5) 28 CM016654.2 African IMGT000061 MAP 74287-74861
IGKV8IGKV8-18D IGKV8-18D*01 P (5) 28 CM016654.2 African IMGT000061 MAP complement(50095-50669)
IGKV9IGKV9-16 IGKV9-16*01 P (18) 28 CM016654.2 African IMGT000061 MAP 81744-82637
IGKV9IGKV9-27 IGKV9-27*01 F 28 CM016654.2 African IMGT000061 MAP 32094-33012
IMGT notes: ↑
  1. noncanonical ACCEPTOR-SPLICE: naann instead of nagnn
  2. no 2nd-CYS: Ser instead of Cys
  3. frameshift in L-PART2, frameshifts in V-REGION: several deletions
  4. frameshifts in L-PART1, frameshift in L-PART2, frameshifts in V-REGION: several insertions and deletions
  5. frameshift in L-PART1, frameshift in L-PART2, frameshifts in V-REGION: several insertions and deletions
  6. no L-PART1, no L-PART2, deletions in V-REGION: AA 1 to 65 are missing
  7. no L-PART1, STOP-CODON in V-REGION: position 52
  8. no L-PART1, frameshift in L-PART2, frameshifts in V-REGION: several insertions and deletions
  9. no L-PART1, no ACCEPTOR-SPLICE, frameshifts in V-REGION: several insertions and deletions
  10. frameshift in V-REGION: insertion of 1 nt in FR2-IMGT
  11. no L-PART2, deletions in V-REGION: AA 1 to 65 are missing, frameshift in V-REGION: insertion of 1 nt in FR3-IMGT
  12. frameshift in V-REGION: deletion of 1 nt in FR3-IMGT
  13. frameshifts in V-REGION: several deletions
  14. frameshift in V-REGION: insertion of 1 nt in FR3-IMGT
  15. no INIT-CODON: Thr instead of Met
  16. no L-PART1, frameshifts in V-REGION: several insertions and deletions
  17. no L-PART1, no V-NONAMER
  18. no INIT-CODON: Arg instead of Met, frameshift in L-PART1, frameshift in L-PART2, frameshifts in V-REGION: several insertions and deletions