Chromosomal localizations
IG and TR loci (Human): Positions on chromosomes
IG, TR and MH loci (Vertebrate): Positions on chromosomes
Locus representations
- IGH:
Human,
Mouse,
Channel catfish,
Bovine,
Chicken,
Dog,
Atlantic salmon,
Rainbow trout,
Horse,
Rhesus monkey,
Western lowland gorilla,
Ring-tailed lemur,
Ferret
- IGK:
Human,
Mouse,
Rabbit (partial),
Pig,
Dog,
Goat,
Sheep,
Bovine,
Cat,
Horse,
Arabian camel,
Rhesus monkey,
Ring-tailed lemur,
Western lowland gorilla,
Sumatran orangutan,
Bornean orangutan,
Ferret
- IGL: Human,
Mouse,
Chicken,
Dog,
Cat,
Bovine,
Goat,
Sheep,
Rhesus monkey,
Western lowland gorilla,
Ring-tailed lemur,
Sumatran orangutan
- TRA: Human,
Mouse,
Dolphin,
Dog,
Zebrafish,
Rhesus monkey,
Rabbit,
Cat,
Bovine,
Sheep,
Naked mole-rat,
Western lowland gorilla
- TRB: Human,
Mouse,
Pig,
Dog,
Rabbit,
Ferret,
Rhesus monkey,
Crab-eating macaque,
Cat,
Sheep,
Naked mole-rat,
Bovine
- TRG: Human,
Mouse,
Bovine,
Sheep,
Dolphin,
Dog,
Rabbit,
Cat,
Rhesus monkey,
Naked mole-rat,
Western lowland gorilla
- TRD: Human,
Mouse,
Dolphin,
Dog,
Zebrafish,
Rhesus monkey,
Rabbit,
Cat,
Bovine,
Sheep,
Naked mole-rat,
Western lowland gorilla
Locus descriptions
Locus bornes:
Locus description:
- IGH: Human (poster),
Mouse (poster),
Teleostei,
Bovine,
Chicken,
Dog,
Atlantic salmon,
Rainbow trout,
Horse,
Rhesus monkey,
Western lowland gorilla,
Ring-tailed lemur,
Ferret
- IGK: Human (poster),
Mouse (poster),
Dog,
Goat,
Sheep,
Bovine,
Cat,
Horse,
Arabian camel,
Rhesus monkey,
Ring-tailed lemur,
Western lowland gorilla,
Sumatran orangutan,
Bornean orangutan,
Ferret
- IGL: Human (poster),
Mouse (poster),
Chicken,
Dog,
Cat,
Bovine,
Goat,
Sheep,
Rhesus monkey,
Western lowland gorilla,
Ring-tailed lemur,
Sumatran orangutan
- TRA: Human (poster),
Mouse (poster 2005),
Dog,
Zebrafish,
Rhesus monkey,
Rabbit,
Cat,
Bovine,
Sheep,
Naked mole-rat,
Western lowland gorilla
- TRB: Human (poster),
Mouse (poster),
Pig,
Dog,
Ferret,
Rhesus monkey,
Crab eating macaque,
Rabbit,
Cat,
Sheep,
Naked mole-rat,
Bovine
- TRG: Human (poster),
Mouse (poster),
Dog,
Dolphin,
Rabbit,
Cat,
Rhesus monkey,
Naked mole-rat,
Western lowland gorilla
- TRD: Human (poster),
Mouse (poster 2005),
Dog,
Zebrafish,
Rhesus monkey,
Rabbit,
Cat,
Bovine,
Sheep,
Naked mole-rat,
Western lowland gorilla
Locus in genome assembly:
IMGT locus with NCBI TPA accession number are available here.
-
IGH: Human,
Mouse,
Bovine,
Chicken,
Dog,
Atlantic salmon,
Rainbow trout,
Horse,
Rhesus monkey,
Western lowland gorilla,
Ring-tailed lemur,
Ferret
-
IGK: Dog,
Goat,
Sheep,
Bovine,
Cat,
Horse,
Arabian camel,
Rhesus monkey,
Ring-tailed lemur,
Western lowland gorilla,
Sumatran orangutan,
Bornean orangutan,
Ferret
-
IGL: Chicken,
Mouse,
Dog,
Cat,
Bovine,
Goat,
Sheep,
Rhesus monkey,
Western lowland gorilla,
Ring-tailed lemur,
Sumatran orangutan
- TRA:
Human,
Mouse,
Dog,
Zebrafish,
Rhesus monkey,
Rabbit,
Cat,
Bovine,
Sheep,
Naked mole-rat,
Western lowland gorilla
- TRB: Human,
Pig,
Dog,
Ferret,
Rhesus monkey,
Crab-eating macaque,
Rabbit,
Cat,
Sheep,
Naked mole-rat,
Bovine
- TRG:
Human,
Dog,
Dolphin,
Rabbit,
Cat,
Rhesus monkey,
Naked mole-rat,
Western lowland gorilla
- TRD:
Human,
Mouse,
Dog,
Zebrafish,
Rhesus monkey,
Rabbit,
Cat,
Bovine,
Sheep,
Naked mole-rat,
Western lowland gorilla
Locus gene repertoire:
Locus gene order:
- IGH: Human,
Mouse,
Bovine,
Chicken,
Dog,
Atlantic salmon,
Rainbow trout,
Horse,
Rhesus monkey,
Western lowland gorilla,
Ring-tailed lemur,
Ferret
- IGK:
Human,
Mouse,
Pig,
Dog,
Goat,
Sheep,
Bovine,
Cat,
Horse,
Arabian camel,
Rhesus monkey,
Ring-tailed lemur,
Western lowland gorilla,
Sumatran orangutan,
Bornean orangutan,
Ferret
- IGL:
Human,
Mouse,
Chicken,
Dog,
Cat,
Bovine,
Goat,
Sheep,
Rhesus monkey,
Western lowland gorilla,
Ring-tailed lemur,
Sumatran orangutan
- TRA: Human,
Mouse,
Dog,
Zebrafish,
Rhesus monkey,
Rabbit,
Cat,
Bovine,
Sheep,
Naked mole-rat,
Western lowland gorilla
- TRB: Human,
Mouse,
Pig,
Dog,
Ferret,
Rhesus monkey,
Crab-eating macaque,
Rabbit,
Cat,
Sheep,
Naked mole-rat,
Bovine
- TRG: Human,
Mouse,
Dog,
Dolphin,
Rabbit,
Cat,
Rhesus monkey,
Naked mole-rat,
Western lowland gorilla
- TRD: Human,
Mouse,
Dog,
Zebrafish,
Rhesus monkey,
Rabbit,
Cat,
Bovine,
Sheep,
Naked mole-rat,
Western lowland gorilla
Gene positions
IMGT Genes on Ensembl and NCBI Gene
- TRA: Human (NCBI 36 assembly, November 2005),
Mouse (GRCm38.p3 C57BL/6J, March 2014)
- TRB: Human (NCBI 36 assembly, November 2005),
Mouse (GRCm38.p3 C57BL/6J, March 2014)
- TRG: Human (NCBI 36 assembly, November 2005),
Mouse (GRCm38.p3 C57BL/6J, March 2014)
- TRD: Human (NCBI 36 assembly, November 2005),
Mouse (GRCm38.p3 C57BL/6J, March 2014)
Gene exon/intron organization
Gene exon/intron splicing sites
Gene tables
IG and TR number of genes: Human
Recombination signal sequence logos:
Human,
Mouse
Dynamic gene tables
Static gene tables
-
IGHV: Human,
Mouse,
Pig,
Teleostei,
Chondrichthyes,
Camel,
Llama,
Alpaca,
Caiman,
Sheep,
Frog,
Rat,
Nonhuman Primates,
Rabbit,
Platypus,
Bovine,
Chicken,
Dog,
Atlantic salmon,
Rainbow trout,
Horse,
IGHD: Human,
Mouse,
Alpaca,
Sheep,
Teleostei,
Chondrichthyes,
Pig,
Rat,
Nonhuman Primates,
Rabbit,
Platypus,
Bovine,
Chicken,
Dog,
Atlantic salmon,
Rainbow trout,
Horse,
IGHJ: Human,
Mouse,
Teleostei,
Chondrichthyes,
Llama,
Alpaca,
Sheep,
Pig,
Rat,
Nonhuman Primates,
Rabbit,
Platypus,
Bovine,
Chicken,
Dog,
Atlantic salmon,
Rainbow trout,
Horse,
IGHC: Human,
Mouse,
Sheep,
Pig,
Possum,
Opossum,
Camel,
Alpaca,
Teleostei,
Chondrichthyes,
Horse,
Rat,
Nonhuman Primates,
Rabbit,
Platypus,
Bovine,
Chicken,
Dog,
Atlantic salmon,
Rainbow trout,
Horse,
- IGKV: Human,
Mouse,
Rabbit,
Possum,
Sheep,
Pig,
Dog,
Nonhuman Primates,
Goat,
Bovine,
Cat,
Horse,
Arabian camel,
IGKJ: Human,
Mouse,
Rabbit,
Possum,
Pig,
Dog,
Nonhuman Primates,
Goat,
Sheep,
Bovine,
Cat,
Horse,
Arabian camel,
IGKC: Human,
Mouse,
Rabbit,
Pig,
Dog,
Nonhuman Primates,
Goat,
Sheep,
Bovine,
Cat,
Horse,
Arabian camel
- IGLV: Human,
Mouse,
Rat,
Possum,
Sheep,
Rabbit,
Pig,
Nonhuman Primates,
Chicken,
Dog,
Cat,
Bovine,
Goat
IGLJ: Human,
Mouse,
Possum,
Sheep,
Rabbit,
Rat,
Pig,
Nonhuman Primates,
Chicken,
Dog,
Cat,
Bovine,
Goat
IGLC: Human,
Mouse,
Rabbit,
Rat,
Pig,
Nonhuman Primates,
Chicken,
Dog,
Cat,
Bovine,
Goat,
Sheep
- IGIV: Teleostei,
Chondrichthyes
IGIJ: Teleostei,
Chondrichthyes
IGIC: Teleostei
- TRAV: Human,
Mouse,
Teleostei,
Goat,
Axolotl,
Nonhuman Primates,
Dog,
Dolphin,
Rabbit,
Cat,
Bovine,
Sheep,
Naked mole-rat
TRAJ: Human,
Mouse,
Teleostei,
Chicken,
Nonhuman Primates,
Pig,
Dog,
Dolphin,
Rabbit,
Cat,
Bovine,
Sheep,
Naked mole-rat
TRAC: Human,
Mouse,
Teleostei,
Nonhuman Primates,
Dog,
Dolphin,
Rabbit,
Cat,
Bovine,
Sheep,
Naked mole-rat
- TRBV: Human,
Mouse,
Pig,
Goat,
Frog,
Nonhuman Primates,
Teleostei,
Dog,
Ferret,
Rabbit,
Cat,
Sheep,
Naked mole-rat,
Bovine
TRBD: Human,
Mouse,
Pig,
Frog,
Nonhuman Primates,
Teleostei,
Dog,
Ferret,
Rabbit,
Cat,
Sheep,
Naked mole-rat,
Bovine
TRBJ: Human,
Mouse,
Pig,
Frog,
Nonhuman Primates,
Teleostei,
Dog,
Ferret,
Rabbit,
Cat,
Sheep,
Naked mole-rat,
Bovine
TRBC: Human,
Mouse,
Pig,
Dog,
Ferret,
Nonhuman Primates,
Rabbit,
Cat,
Sheep,
Naked mole-rat,
Bovine
- TRGV: Human,
Mouse,
Sheep,
Bovine,
Dog,
Teleostei,
Camel,
Dolphin,
Rabbit,
Cat,
Nonhuman Primates,
Naked mole-rat
TRGJ: Human,
Mouse,
Sheep,
Bovine,
Dog,
Camel,
Dolphin,
Rabbit,
Cat,
Nonhuman Primates,
Naked mole-rat
TRGC: Human,
Mouse,
Sheep,
Bovine,
Dog,
Camel,
Dolphin,
Rabbit,
Cat,
Nonhuman Primates,
Naked mole-rat
- TRDV: Human,
Mouse,
Dog,
Nonhuman Primates,
Dolphin,
Rabbit,
Cat,
Bovine,
Sheep,
Naked mole-rat
TRDD: Human,
Mouse,
Teleostei,
Dog,
Nonhuman Primates,
Dolphin,
Rabbit,
Cat,
Bovine,
Sheep,
Naked mole-rat
TRDJ: Human,
Mouse,
Teleostei,
Pig,
Dog,
Nonhuman Primates,
Dolphin,
Rabbit,
Cat,
Bovine,
Sheep,
Naked mole-rat
TRDC: Human,
Mouse,
Teleostei,
Dog,
Nonhuman Primates,
Dolphin,
Rabbit,
Cat,
Bovine,
Sheep,
Naked mole-rat
Potential germline repertoires
-
IGHV, IGHD, IGHJ: Bovine,
Mouse
Chicken,
Dog,
Atlantic Salmon,
rainbow trout,
Horse,
Rhesus monkey,
Western lowland gorilla,
Ring-tailed lemur,
Ferret
-
IGKV, IGKJ: Dog,
Goat,
Sheep,
Bovine,
Cat,
Horse,
Arabian camel,
Rhesus monkey
Ring-tailed lemur,
Western lowland gorilla,
Sumatran orangutan,
Bornean orangutan,
Ferret
-
IGLV, IGLJ: Mouse,
Pig,
Chicken,
Dog,
Cat,
Bovine,
Goat,
Sheep,
Rhesus monkey,
Western lowland gorilla,
Ring-tailed lemur,
Sumatran orangutan
-
TRAV, TRAJ:
Mouse,
Dog,
Zebrafish,
Rhesus monkey,
Rabbit,
Cat,
Bovine,
Sheep,
Naked mole-rat,
Western lowland gorilla
-
TRBV, TRBD, TRBJ: Dog,
Ferret,
Rhesus monkey,
Crab-eating macaque,
Rabbit,
Pig,
Cat,
Sheep,
Naked mole-rat,
Bovine
-
TRGV, TRGJ: Dog,
Dolphin,
Rabbit,
Cat,
Rhesus monkey,
Naked mole-rat,
Western lowland gorilla
-
TRDV, TRDD, TRDJ: Mouse,
Dog,
Zebrafish,
Rhesus monkey,
Rabbit,
Cat,
Bovine,
Sheep,
Naked mole-rat,
Western lowland gorilla
Lists of human (Homo sapiens) IG and TR genes, groups, major loci and orphons
and links between IMGT/GENE-DB, HGNC, NCBI Gene and OMIM
Lists of Mouse (Mus musculus) IG and TR genes, groups, major loci
and links between IMGT/GENE-DB, MGI and NCBI Gene
Clans (IMGT Index)
Correspondence between chain types and C genes : IG and TR (all vertebrate species)
Correspondence between nomenclatures
Correspondence between species
- Created:
- 18/04/1997
- Last updated:
- Tuesday, 26-Sep-2023 21:00:07 CEST
- Editor:
- Chantal Ginestoux, Amélie Houles