"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene, when the data have been confirmed by several studies.
Functionality is shown in parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
IMGT allele confirmation: A scoring system is employed to indicate the number of IMGT/LIGM-DB reference sequences and other sequences from the literature in which an IG or TR gene allele has been identified and annotated.
| IMGT gene name | IMGT allele name | Score for IMGT allele confirmation | Fct | Chromosomosal localization | R T Pr | IMGT/LIGM-DB reference sequences | IMGT/LIGM-DB sequences from the literature | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Clone names | Isolate | Accession numbers | Positions in the sequence (J-GENE-UNIT) or J-REGION (*) | Secondary accession numbers | Clone names | Isolate | Accession numbers | Positions in the sequence (J-GENE-UNIT) or J-REGION (*) | ||||||
| TRAJ1 | TRAJ1*01 | P (1) | AG05252 | IMGT000301 MAP | 1035099-1035188 | |||||||||
| TRAJ2 | TRAJ2*01 | F | AG05252 | IMGT000301 MAP | 1034133-1034226 | |||||||||
| TRAJ3 | TRAJ3*01 | F | AG05252 | IMGT000301 MAP | 1033247-1033336 | |||||||||
| TRAJ4 | TRAJ4*01 | F | AG05252 | IMGT000301 MAP | 1032267-1032357 | |||||||||
| TRAJ5 | TRAJ5*01 | F | AG05252 | IMGT000301 MAP | 1030313-1030400 | |||||||||
| TRAJ6 | TRAJ6*01 | F | AG05252 | IMGT000301 MAP | 1029136-1029225 | |||||||||
| TRAJ7 | TRAJ7*01 | F | AG05252 | IMGT000301 MAP | 1027688-1027772 | |||||||||
| TRAJ8 | TRAJ8*01 | F | AG05252 | IMGT000301 MAP | 1026226-1026313 | |||||||||
| TRAJ9 | TRAJ9*01 | F | AG05252 | IMGT000301 MAP | 1025634-1025722 | |||||||||
| TRAJ10 | TRAJ10*01 | F | AG05252 | IMGT000301 MAP | 1023570-1023661 | |||||||||
| TRAJ11 | TRAJ11*01 | F | AG05252 | IMGT000301 MAP | 1022575-1022662 | |||||||||
| TRAJ12 | TRAJ12*01 | F | AG05252 | IMGT000301 MAP | 1022009-1022096 | |||||||||
| TRAJ13 | TRAJ13*01 | F | AG05252 | IMGT000301 MAP | 1021160-1021250 | |||||||||
| TRAJ14 | TRAJ14*01 | F | AG05252 | IMGT000301 MAP | 1020399-1020478 | |||||||||
| TRAJ15 | TRAJ15*01 | F | AG05252 | IMGT000301 MAP | 1019701-1019788 | |||||||||
| TRAJ16 | TRAJ16*01 | ORF (2) | AG05252 | IMGT000301 MAP | 1018605-1018692 | |||||||||
| TRAJ17 | TRAJ17*01 | F | AG05252 | IMGT000301 MAP | 1017236-1017326 | |||||||||
| TRAJ18 | TRAJ18*01 | F | AG05252 | IMGT000301 MAP | 1016042-1016135 | |||||||||
| TRAJ19 | TRAJ19*01 | ORF (3) | AG05252 | IMGT000301 MAP | 1015660-1015742 | |||||||||
| TRAJ20 | TRAJ20*01 | F | AG05252 | IMGT000301 MAP | 1014718-1014802 | |||||||||
| TRAJ21 | TRAJ21*01 | F | AG05252 | IMGT000301 MAP | 1013993-1014075 | |||||||||
| TRAJ22 | TRAJ22*01 | F | AG05252 | IMGT000301 MAP | 1012434-1012524 | |||||||||
| TRAJ23 | TRAJ23*01 | F | AG05252 | IMGT000301 MAP | 1010794-1010884 | |||||||||
| TRAJ24 | TRAJ24*01 | F | AG05252 | IMGT000301 MAP | 1010346-1010436 | |||||||||
| TRAJ25 | TRAJ25*01 | F | AG05252 | IMGT000301 MAP | 1009185-1009272 | |||||||||
| TRAJ26 | TRAJ26*01 | F | AG05252 | IMGT000301 MAP | 1008817-1008904 | |||||||||
| TRAJ27 | TRAJ27*01 | F | AG05252 | IMGT000301 MAP | 1006644-1006730 | |||||||||
| TRAJ28 | TRAJ28*01 | F | AG05252 | IMGT000301 MAP | 1005994-1006087 | |||||||||
| TRAJ29 | TRAJ29*01 | F | AG05252 | IMGT000301 MAP | 1004339-1004426 | |||||||||
| TRAJ30 | TRAJ30*01 | F | AG05252 | IMGT000301 MAP | 1003253-1003337 | |||||||||
| TRAJ31 | TRAJ31*01 | F | AG05252 | IMGT000301 MAP | 1001372-1001456 | |||||||||
| TRAJ32 | TRAJ32*01 | F | AG05252 | IMGT000301 MAP | 999745-999838 | |||||||||
| TRAJ33 | TRAJ33*01 | F | AG05252 | IMGT000301 MAP | 999010-999094 | |||||||||
| TRAJ34 | TRAJ34*01 | F | AG05252 | IMGT000301 MAP | 998024-998109 | |||||||||
| TRAJ35 | TRAJ35*01 | F | AG05252 | IMGT000301 MAP | 996980-997066 | |||||||||
| TRAJ36 | TRAJ36*01 | F | AG05252 | IMGT000301 MAP | 995438-995524 | |||||||||
| TRAJ37 | TRAJ37*01 | F | AG05252 | IMGT000301 MAP | 994053-994142 | |||||||||
| TRAJ38 | TRAJ38*01 | P (4) | AG05252 | IMGT000301 MAP | 992539-992628 | |||||||||
| TRAJ39 | TRAJ39*01 | F | AG05252 | IMGT000301 MAP | 991913-992003 | |||||||||
| TRAJ40 | TRAJ40*01 | F | AG05252 | IMGT000301 MAP | 990006-990094 | |||||||||
| TRAJ41 | TRAJ41*01 | F | AG05252 | IMGT000301 MAP | 987976-988065 | |||||||||
| TRAJ42 | TRAJ42*01 | F | AG05252 | IMGT000301 MAP | 987219-987312 | |||||||||
| TRAJ43 | TRAJ43*01 | F | AG05252 | IMGT000301 MAP | 986243-986324 | |||||||||
| TRAJ44 | TRAJ44*01 | F | AG05252 | IMGT000301 MAP | 985150-985240 | |||||||||
| TRAJ45 | TRAJ45*01 | P (5) | AG05252 | IMGT000301 MAP | 984255-984350 | |||||||||
| TRAJ46 | TRAJ46*01 | F | AG05252 | IMGT000301 MAP | 983718-983808 | |||||||||
| TRAJ47 | TRAJ47*01 | F | AG05252 | IMGT000301 MAP | 983163-983247 | |||||||||
| TRAJ48 | TRAJ48*01 | F | AG05252 | IMGT000301 MAP | 981146-981236 | |||||||||
| TRAJ49 | TRAJ49*01 | F | AG05252 | IMGT000301 MAP | 980172-980255 | |||||||||
| TRAJ50 | TRAJ50*01 | F | AG05252 | IMGT000301 MAP | 979303-979390 | |||||||||
| TRAJ51 | TRAJ51*01 | ORF (6) | AG05252 | IMGT000301 MAP | 977890-977980 | |||||||||
| TRAJ52 | TRAJ52*01 | F | AG05252 | IMGT000301 MAP | 976934-977030 | |||||||||
| TRAJ53 | TRAJ53*01 | F | AG05252 | IMGT000301 MAP | 973702-973795 | |||||||||
| TRAJ54 | TRAJ54*01 | F | AG05252 | IMGT000301 MAP | 972964-973051 | |||||||||
| TRAJ55 | TRAJ55*01 | P (1) | AG05252 | IMGT000301 MAP | 972373-972457 | |||||||||
| TRAJ56 | TRAJ56*01 | ORF (7) | AG05252 | IMGT000301 MAP | 970199-970288 | |||||||||
| TRAJ57 | TRAJ57*01 | F | AG05252 | IMGT000301 MAP | 969551-969641 | |||||||||
| TRAJ58 | TRAJ58*01 | F (8) | AG05252 | IMGT000301 MAP | 968386-968476 | |||||||||
| TRAJ59 | TRAJ59*01 | ORF (9) | AG05252 | IMGT000301 MAP | 967234-967321 | |||||||||
| TRAJ60 | TRAJ60*01 | P (1) | AG05252 | IMGT000301 MAP | 966987-967071 | |||||||||
| TRAJ61 | TRAJ61*01 | P (10) | AG05252 | IMGT000301 MAP | 965999-966085 | |||||||||