Rainbow trout (Oncorhynchus mykiss) IGH locus on chromosome 13 (locus A)
- The rainbow trout (Oncorhynchus mykiss) IGH locus is on chromosome 13.
The orientation of the locus is forward (FWD).
- The rainbow trout (Oncorhynchus mykiss) IGH locus spans 365 kilobases (kb),
from 10 kb upstream of the most 5' gene in the locus, IGHV16-48-1 (P), to 10 kb
downstream of the most 3' gene in the locus, IGHJ6 (P).
The Locus representation
encompasses 360 kb.
- The rainbow trout (Oncorhynchus mykiss) IGH locus consists
of 82 IGHV genes belonging to 15 IGHV subgroups, 12 IGHD genes belonging to 6 IGHD sets, 10 IGHJ genes belonging to 10 IGHJ sets, and
3 IGHC genes.
- The IGHV genes span 287 kilobases (kb), the IGHD genes span 18 kilobases (kb), the IGHJ genes span 13 kilobases (kb) and
the IGHC genes span 28 kilobases (kb).
Rainbow trout (Oncorhynchus mykiss) IGH locus on chromosome 12 (locus B)
- The rainbow trout (Oncorhynchus mykiss) IGH locus is on chromosome 12.
The orientation of the locus is forward (FWD).
- The rainbow trout (Oncorhynchus mykiss) IGH locus spans 503 kilobases (kb),
from 10 kb upstream of the most 5' gene in the locus, IGHV16D-79 (P), to 10 kb
downstream of the most 3' gene in the locus, IGHMD (F).
The Locus representation
encompasses 490 kb.
- The rainbow trout (Oncorhynchus mykiss) IGH locus consists
of 119 IGHV genes belonging to 14 IGHV subgroups, 19 IGHD genes belonging to 6 IGHD sets, 9 IGHJ genes belonging to 9 IGHJ sets, and
2 IGHC genes.
- The IGHV genes span 395 kilobases (kb), the IGHD genes span 49 kilobases (kb), the IGHJ genes span 8 kilobases (kb) and
the IGHC genes span 33 kilobases (kb).
- Created:
- 18/03/2019
- Last updated:
- Friday, 22-Sep-2023 18:22:18 CEST
- Author:
- Saida Hadi-Saljoqi and Marie-Paule Lefranc
