Bornean orangutan (Pongo pygmaeus) IGHV genes
The Bornean orangutan (
Pongo pygmaeus) IGH locus on chromosome 15 comprises 177 IGHV genes belonging to 7 IGHV subgroups and 4 clans :
| IMGT group |
IMGT subgroup |
Functional |
ORF |
Pseudogene |
Total |
| IGHV |
IGHV1 |
6 |
3 |
15(8:7) |
24 |
| IGHV2 |
4 |
1 |
0 |
5 |
| IGHV3 |
30 |
2 |
37(19:18) |
69 |
| IGHV4 |
16 |
0 |
2(2:0) |
18 |
| IGHV5 |
2 |
0 |
1(1:0) |
3 |
| IGHV7 |
1 |
1 |
3(2:1) |
5 |
| IGHV8 |
0 |
0 |
2(1:1) |
2 |
| IGHV(I) |
0 |
0 |
1(0:1) |
1 |
| IGHV(II) |
0 |
0 |
31(0:31) |
31 |
| IGHV(III) |
0 |
0 |
18(0:18) |
18 |
| IGHV(IV) |
0 |
0 |
1(0:1) |
1 |
| Total |
59 |
7 |
111 |
177 |
In the column 'Pseudogene', the number of pseudogenes with V-REGION in-frame and the number of pseudogenes with frameshift(s) are shown
separated by two dots, between parentheses.
Bornean orangutan (Pongo pygmaeus) IGHD genes
The Bornean orangutan (
Pongo pygmaeus) IGH locus on chromosome 15 comprises 31 IGHD genes :
| IMGT group |
IMGT set or subgroup (if any) |
Functional |
ORF |
Pseudogene |
Total |
| IGHD |
IGHD1 |
5 |
1 |
0 |
6 |
| IGHD2 |
2 |
2 |
0 |
4 |
| IGHD3 |
5 |
0 |
0 |
5 |
| IGHD4 |
1 |
4 |
0 |
5 |
| IGHD5 |
1 |
4 |
0 |
5 |
| IGHD6 |
4 |
1 |
0 |
5 |
| IGHD7 |
1 |
0 |
0 |
1 |
| Total |
19 |
12 |
0 |
31 |
Bornean orangutan (Pongo pygmaeus) IGHJ genes
The Bornean orangutan (
Pongo pygmaeus) IGH locus on chromosome 15 comprises 9 IGHJ genes :
| IMGT group |
IMGT set or subgroup (if any) |
Functional |
ORF |
Pseudogene |
Total |
| IGHJ |
IGHJ1 |
0 |
0 |
1 |
1 |
| IGHJ2 |
1 |
0 |
0 |
1 |
| IGHJ3 |
0 |
1 |
0 |
1 |
| IGHJ4 |
0 |
1 |
0 |
1 |
| IGHJ5 |
1 |
0 |
0 |
1 |
| IGHJ6 |
1 |
0 |
0 |
1 |
| IGHJ7 |
0 |
1 |
0 |
1 |
| IGHJ8 |
0 |
0 |
1 |
1 |
| IGHJ9 |
0 |
1 |
0 |
1 |
| Total |
3 |
4 |
2 |
9 |
More information:
Gene table: Bornean orangutan (Pongo pygmaeus) IGHV
Gene table: Bornean orangutan (Pongo pygmaeus) IGHD
Gene table: Bornean orangutan (Pongo pygmaeus) IGHJ
Locus description: Bornean orangutan (Pongo pygmaeus) IGH