Bovine (Bos taurus) TRAV genes

The bovine (Bos taurus) TRA locus on chromosome 10 comprises 183 TRAV genes belonging to 40 TRAV subgroups:
IMGT group IMGT subgroup Functional ORF Pseudogene Total
TRAV TRAV1 1 0 0 1
TRAV2 5 0 2 (0:2) 7
TRAV3 6 (+1)* 0 (+1 (0:1))* 7
TRAV4 0 0 1 (1:0) 1
TRAV5 1 0 0 1
TRAV6 0 0 1 (0:1) 1
TRAV8 1 0 4 (0:4) 5
TRAV9 4 0 2 (0:2) 6
TRAV10 0 1 2 (2:0) 3
TRAV11 0 0 3 (3:0) 3
TRAV12 2 (+1)* 0 (+1 (0:1))* 3
TRAV13 2 0 2 (0:2) 4
TRAV14 1 (+1)* 1 1 (0:1) (+1 (1:0))* 4
TRAV16 1 0 0 1
TRAV17 1 0 2 (2:0) 3
TRAV18 1 (+1)* 2 (+1)* 1 (0:1) 5
TRAV19 2 (+1)* (+1)* 1 (0:1) (+1 (1:0))* 4
TRAV20 2 1 1 (0:1) 4
TRAV21 2 1 1 (0:1) 4
TRAV22 6 (+2)* 3 (+1)* 5 (3:2) (+1 (0:1))* 16
TRAV23 1 (+2)* 10 (3:7) (+2 (2:0))* 13
TRAV24 1 (+1)* (+1)* 5 (3:2) 7
TRAV25 4 (+1)* 1 9 (6:3) (+1 (0:1))* 15
TRAV26 0 0 1 (1:0) 1
TRAV27 0 (+1)* (+1 (0:1))* 1
TRAV28 2 0 1 (0:1) 3
TRAV29 1 1 0 2
TRAV33 (+1)* 0 2 (0:2) (+1 (0:1))* 3
TRAV34 0 0 2 (0:2) 2
TRAV35 2 0 0 2
TRAV36 1 0 1 (0:1) 2
TRAV37 0 0 2 (0:2) 2
TRAV38 6 0 0 6
TRAV39 1 1 0 2
TRAV40 0 0 1 (0:1) 1
TRAV41 1 0 0 1
TRAV43 3 0 0 3
TRAV44 8 (+1)* 1 8 (3:5) (+1 (0:1))* 18
TRAV45 10 (+2)* 1 2 (2:0) (+2 (1:1))* 15
TRAV46 0 0 1 (0:1) 1
Total 79 (+13)* 14 (+7)* 74 (+13)* 183
In the column 'Pseudogene', the number of pseudogenes with V-REGION in-frame and the number of pseudogenes with frameshift(s) are shown separated by two dots, between parentheses.
* An asterisk indicates that the following genes have alleles with different functionalities:
FUNCTIONAL or PSEUDOGENE (TRAV3-3, TRAV12-2, TRAV14-3, TRAV22-7, TRAV25-12, TRAV33-3, TRAV44-16, TRAV45-13 and TRAV45-14).
FUNCTIONAL or ORF (TRAV18-1, TRAV22-1 and TRAV24-2).
PSEUDOGENE or ORF (TRAV23-8D, TRAV23-11 and TRAV27).
FUNCTIONAL or ORF or PSEUDOGENE (TRAV19-3).

Bovine (Bos taurus) TRAJ genes

The bovine (Bos taurus) TRA locus on chromosome 10 comprises 60 TRAJ genes:
IMGT group IMGT set or subgroup (if any) Functional ORF Pseudogene Total
TRAJ TRAJ1 1 0 0 1
TRAJ2 1 0 0 1
TRAJ3 1 0 0 1
TRAJ4 (+1)* 0 (+1)* 1
TRAJ5 1 0 0 1
TRAJ6 1 0 0 1
TRAJ7 1 0 0 1
TRAJ8 2 0 0 2
TRAJ9 1 0 0 1
TRAJ10 1 0 0 1
TRAJ11 1 0 0 1
TRAJ12 1 0 0 1
TRAJ13 0 0 1 1
TRAJ14 0 0 1 1
TRAJ15 (+1)* 0 (+1)* 1
TRAJ16 1 0 0 1
TRAJ17 1 0 0 1
TRAJ18 1 0 0 1
TRAJ19 0 0 1 1
TRAJ20 1 0 0 1
TRAJ21 1 0 0 1
TRAJ22 1 0 0 1
TRAJ23 1 0 0 1
TRAJ24 1 0 0 1
TRAJ25 1 0 0 1
TRAJ26 0 1 0 1
TRAJ27 1 0 0 1
TRAJ28 1 0 0 1
TRAJ29 1 0 0 1
TRAJ30 1 0 0 1
TRAJ31 1 0 0 1
TRAJ32 1 0 0 1
TRAJ33 1 0 0 1
TRAJ34 1 0 0 1
TRAJ35 0 1 0 1
TRAJ36 1 0 0 1
TRAJ37 1 0 0 1
TRAJ38 1 0 0 1
TRAJ39 1 0 0 1
TRAJ40 1 0 0 1
TRAJ41 1 0 0 1
TRAJ42 1 0 0 1
TRAJ43 1 0 0 1
TRAJ44 1 0 0 1
TRAJ45 1 0 0 1
TRAJ46 1 0 0 1
TRAJ47 1 0 0 1
TRAJ48 1 0 0 1
TRAJ49 1 0 0 1
TRAJ50 1 0 0 1
TRAJ52 1 0 0 1
TRAJ53 1 0 0 1
TRAJ54 1 0 0 1
TRAJ56 1 0 0 1
TRAJ57 1 0 0 1
TRAJ58 1 0 0 1
TRAJ59 1 0 0 1
TRAJ60 1 0 0 1
TRAJ61 0 0 1 1
Total 52 (+2) 2 4 (+2) 60
* FUNCTIONAL or PSEUDOGENE

More information:
Gene table: bovine (Bos taurus) TRAV
Gene table: bovine (Bos taurus) TRAJ
Locus description: bovine (Bos taurus) TRA
Potential germline repertoire: bovine (Bos taurus) TRDV, TRDD and TRDJ genes on chromosome 10