IMGT Repertoire (IG and TR)
Potential germline repertoire: Crab-eating macaque (Macaca fascicularis) TRBV, TRBD and TRBJ genes on chromosome 3
Crab-eating macaque (Macaca fascicularis) TRBV genes
The Crab-eating macaque (Macaca fascicularis) TRB locus comprises 77 TRBV genes belonging to 33 TRBV subgroups:- 54 FUNCTIONAL
- 4 ORF (Open Reading Frame)
- 19 PSEUDOGENE
- the 5' V-CLUSTER, classically in 5' of the TRBD, TRBJ and TRBC, includes 78 TRBV genes belonging to 32 subgroups.
- the 3' V-CLUSTER, downstream of the TRBC in inverted orientation, includes 1 TRBV gene.
| Localization of the V-CLUSTER in the locus | IMGT subgroup | Functional | ORF | Pseudogene | Total |
|---|---|---|---|---|---|
| 5' V-CLUSTER | TRBV1 | 0 | 0 | 3 (1:2) | 3 |
| TRBV2 | 3 | 0 | 0 | 3 | |
| TRBV3 | 4 | 0 | 0 | 4 | |
| TRBV4 | 3 | 0 | 0 | 3 | |
| TRBV5 | 6 | 0 | 4 (3:1) | 10 | |
| TRBV6 | 4 | 3 | 3 (1:2) | 10 | |
| TRBV7 | 9 | 0 | 2 (1:1) | 11 | |
| TRBV8 | 0 | 0 | 2 (0:2) | 2 | |
| TRBV9 | 1 | 0 | 0 | 1 | |
| TRBV10 | 3 | 0 | 0 | 3 | |
| TRBV11 | 3 | 0 | 0 | 3 | |
| TRBV12 | 3 | 1 | 0 | 4 | |
| TRBV13 | 1 | 0 | 0 | 1 | |
| TRBV14 | 1 | 0 | 0 | 1 | |
| TRBV15 | 1 | 0 | 0 | 1 | |
| TRBV16 | 1 | 0 | 0 | 1 | |
| TRBV17 | 0 | 0 | 1 (0:1) | 1 | |
| TRBV18 | 1 | 0 | 0 | 1 | |
| TRBV19 | 1 | 0 | 0 | 1 | |
| TRBV20 | 1 | 0 | 0 | 1 | |
| TRBV21 | 1 | 0 | 0 | 1 | |
| TRBV22 | 0 | 0 | 1 (1:0) | 1 | |
| TRBV23 | 1 | 0 | 0 | 1 | |
| TRBV24 | 1 | 0 | 0 | 1 | |
| TRBV25 | 1 | 0 | 0 | 1 | |
| TRBV26 | 0 | 0 | 1 (0:1) | 1 | |
| TRBV27 | 1 | 0 | 0 | 1 | |
| TRBV28 | 1 | 0 | 0 | 1 | |
| TRBV29 | 1 | 0 | 0 | 1 | |
| TRBVA | 0 | 0 | 1 (0:1) | 1 | |
| TRBVB | 0 | 0 | 1 (0:1) | 1 | |
| TRBVC | 0 | 0 | 1 (0:1) | 1 | |
| 3' V-CLUSTER | TRBV30 | 1 | 0 | 0 | 1 |
| Total | 54 | 4 | 20 | 78 | |
In the column 'Pseudogene', the number of pseudogenes with V-REGION in-frame and the number of pseudogenes with frameshift(s) are shown separated by two dots, between parentheses.
Crab-eating macaque (Macaca fascicularis) TRBD genes
The Crab-eating macaque (Macaca fascicularis) TRB locus comprises 2 TRBD genes belonging to 2 TRBD sets:| IMGT group | IMGT set or subgroup (if any) | Functional | ORF | Pseudogene | Total |
|---|---|---|---|---|---|
| TRBD | TRBD1 | 1 | 0 | 0 | 1 |
| TRBD2 | 1 | 0 | 0 | 1 | |
| Total | 2 | 0 | 0 | 2 | |
Crab-eating macaque (Macaca fascicularis) TRBJ genes
The Crab-eating macaque (Macaca fascicularis) TRB locus comprises 14 TRBJ genes belonging to 2 TRBJ sets:- 13 FUNCTIONAL
- 1 ORF
| IMGT group | IMGT set or subgroup (if any) | Functional | ORF | Pseudogene | Total |
|---|---|---|---|---|---|
| TRBJ | TRBJ1 | 6 | 0 | 0 | 6 |
| TRBJ2 | 7 | 1 | 0 | 8 | |
| Total | 13 | 1 | 0 | 14 | |
More information:
Gene table: Crab-eating macaque (Macaca fascicularis) TRBV
Gene table: Crab-eating macaque (Macaca fascicularis) TRBD
Gene table: Crab-eating macaque (Macaca fascicularis) TRBJ
Locus description: Crab-eating macaque (Macaca fascicularis) TRB
Created: 28/07/2021
Last updated: 02/10/2025 13:10
Author: Joumana
Editor: Chantal Ginestoux
Last updated: 02/10/2025 13:10
Author: Joumana
Editor: Chantal Ginestoux
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