Sumatran orangutan (Pongo abelii) IGHV genes
The Sumatran orangutan (
Pongo abelii) IGH locus comprises 139 IGHV genes belonging to 7 IGHV subgroups and 4 clans :
| IMGT group |
IMGT subgroup |
Functional |
ORF |
Pseudogene |
Total |
| IGHV |
IGHV1 |
5 |
3 |
11(5:6) |
19 |
| IGHV2 |
4 |
0 |
1(1:0) |
5 |
| IGHV3 |
27 |
1 |
28(12:16) |
56 |
| IGHV4 |
9 |
0 |
1(0:1) |
10 |
| IGHV5 |
2 |
0 |
0 |
2 |
| IGHV7 |
1 |
0 |
3(2:1) |
4 |
| IGHV8 |
0 |
0 |
2(1:1) |
2 |
| IGHV(I) |
0 |
0 |
1(0:1) |
1 |
| IGHV(II) |
0 |
0 |
25(0:25) |
25 |
| IGHV(III) |
0 |
0 |
14(0:14) |
14 |
| IGHV(IV) |
0 |
0 |
1(0:1) |
1 |
| Total |
47 |
5 |
87 |
139 |
In the column 'Pseudogene', the number of pseudogenes with V-REGION in-frame and the number of pseudogenes with frameshift(s) are shown
separated by two dots, between parentheses.
Sumatran orangutan (Pongo abelii) IGHD genes
The Sumatran orangutan (
Pongo abelii) IGH locus comprises 31 IGHD genes :
| IMGT group |
IMGT set or subgroup (if any) |
Functional |
ORF |
Pseudogene |
Total |
| IGHD |
IGHD1 |
5 |
1 |
0 |
6 |
| IGHD2 |
2 |
2 |
0 |
4 |
| IGHD3 |
5 |
0 |
0 |
5 |
| IGHD4 |
1 |
4 |
0 |
5 |
| IGHD5 |
1 |
4 |
0 |
5 |
| IGHD6 |
4 |
1 |
0 |
5 |
| IGHD7 |
1 |
0 |
0 |
1 |
| Total |
19 |
12 |
0 |
31 |
Sumatran orangutan (Pongo abelii) IGHJ genes
The Sumatran orangutan (
Pongo abelii) IGH locus comprises 9 IGHJ genes :
| IMGT group |
IMGT set or subgroup (if any) |
Functional |
ORF |
Pseudogene |
Total |
| IGHJ |
IGHJ1 |
0 |
0 |
1 |
1 |
| IGHJ2 |
1 |
0 |
0 |
1 |
| IGHJ3 |
0 |
1 |
0 |
1 |
| IGHJ4 |
0 |
1 |
0 |
1 |
| IGHJ5 |
1 |
0 |
0 |
1 |
| IGHJ6 |
1 |
0 |
0 |
1 |
| IGHJ7 |
0 |
1 |
0 |
1 |
| IGHJ8 |
0 |
0 |
1 |
1 |
| IGHJ9 |
0 |
1 |
0 |
1 |
| Total |
3 |
4 |
2 |
9 |
More information:
Gene table: Sumatran orangutan (Pongo abelii) IGHV
Gene table: Sumatran orangutan (Pongo abelii) IGHD
Gene table: Sumatran orangutan (Pongo abelii) IGHJ
Locus description: Sumatran orangutan (Pongo abelii) IGH