IMGT Repertoire (IG and TR)

Potential germline repertoire: Sumatran orangutan (Pongo abelii) IGKV and IGKJ genes on chromosome 2A

For a comparative repertoire between different assemblies' annotations, see: Sumatran orangutan (Pongo abelii) IGK locus gene repertoire per assembly.

Here you are: IMGT Web resources > IMGT Repertoire (IG and TR) > 1. Locus and genes

Sumatran orangutan (Pongo abelii) IGKV genes

The Sumatran orangutan (Pongo abelii) IGK locus on chromosome 2A comprises 77 IGKV genes belonging to 8 IGKV subgroups and 1 IGKV clan :

IMGT group	IMGT subgroup	Functional	ORF	Pseudogene	Total
IGKV	IGKV1	14	3	9(4:5)	26
	IGKV2	7	0	13(5:8)	20
	IGKV3	6	0	5(0:5)	11
	IGKV4	1	0	0	1
	IGKV5	1	0	0	1
	IGKV6	1	1	1(1:0)	3
	IGKV7	1	0	0	1
	IGKV9	0	1	2(0:2)	3
	IGKV(II)	0	0	11(0:11)	11
Total		31	5	41	77

In the column 'Pseudogene', the number of pseudogenes with V-REGION in-frame and the number of pseudogenes with frameshift(s) are shown separated by two dots, between parentheses.

Sumatran orangutan (Pongo abelii) IGKJ genes

The Sumatran orangutan (Pongo abelii) IGK locus on chromosome 2A comprises 5 IGKJ genes :

IMGT group	IMGT set or subgroup (if any)	Functional	Pseudogene	Total
IGKJ	IGKJ1	1	0	1
	IGKJ2	1	0	1
	IGKJ3	1	0	1
	IGKJ4	1	0	1
	IGKJ5	0	1(1:0)	1
Total		4	1	5

In the column 'Pseudogene', the number of pseudogenes with V-REGION in-frame and the number of pseudogenes with frameshift(s) are shown separated by two dots, between parentheses.

More information:
Gene table: Sumatran orangutan (Pongo abelii) IGKV
Gene table: Sumatran orangutan (Pongo abelii) IGKJ
Locus description: Sumatran orangutan (Pongo abelii) IGK