When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).
Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.
1 2 3 4 5 6 7 8 8A 9 10 11 12 13 14 15 16 17 18 19 G Q G V E Q P D N L M S V E G T F A AF259072 TRAV1*01 F V-REGION gDNA gga cag ggc gtg gag cag ... cct ... gac aac ttg atg tct gta gag gga acc ttt gct AE007512 TRAV1*01 F V-REGION gDNA --- --- --- --- --- --- ... --- ... --- --- --- --- --- --- --- --- --- --- --- AE008683 TRAV1*01 F V-REGION gDNA --- --- --- --- --- --- ... --- ... --- --- --- --- --- --- --- --- --- --- --- A K IMGT000082 TRAV1*02 F V-REGION gDNA --- --- --t --- --- --- ... --- ... -c- --a --- --- --- --g --- --- --- --- --- A K M22604 TRAV1*02 F V-REGION gDNA --- --- --t --- --- --- ... --- ... -c- --a --- --- --- --g --- --- --- --- --- ___________________CDR1-IMGT____________________ 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 R V N C T Y S T S G F N G L AF259072 TRAV1*01 F V-REGION gDNA cgg gtc aac tgc aca tac agc acc tca ggg ... ... ... ... ... ... ttc aat ggg tta AE007512 TRAV1*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- --- --- --- AE008683 TRAV1*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- --- --- --- IMGT000082 TRAV1*02 F V-REGION gDNA --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- --c --- --- M22604 TRAV1*02 F V-REGION gDNA --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- --c --- --- _______________C 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 S W Y Q Q R E G H A P V F L S Y V V L AF259072 TRAV1*01 F V-REGION gDNA tcc tgg tac cag caa cgt gaa ggc cac gcc ccc gta ttt ctt tct tat gtt gtt ttg ... AE007512 TRAV1*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ... AE008683 TRAV1*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ... Q IMGT000082 TRAV1*02 F V-REGION gDNA --- --- --- --- --- --- --- --- --a --- --t --- --- --- --- --- --- --- --- ... Q M22604 TRAV1*02 F V-REGION gDNA --- --- --- --- --- --- --- --- --a --- --t --- --- --- --- --- --- --- --- ... DR2-IMGT________________ 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 D G L K D S G H F S T F AF259072 TRAV1*01 F V-REGION gDNA ... ... ... gat ggt ttg aag gac agt ... ... ... ... ... ggg cat ttc tcc aca ttc AE007512 TRAV1*01 F V-REGION gDNA ... ... ... --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- --- --- AE008683 TRAV1*01 F V-REGION gDNA ... ... ... --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- --- --- IMGT000082 TRAV1*02 F V-REGION gDNA ... ... ... --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- --t --- M22604 TRAV1*02 F V-REGION gDNA ... ... ... --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- --t --- 80 81 82 83 84 84A 85 86 87 88 89 90 91 92 93 94 95 96 97 98 L S R S N G Y S Y L L L T E L Q I K D AF259072 TRAV1*01 F V-REGION gDNA ctg agc cgc tcg aat ... ggg tac agt tac ctg ctt ctg aca gag ctc cag atc aaa gac AE007512 TRAV1*01 F V-REGION gDNA --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- AE008683 TRAV1*01 F V-REGION gDNA --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- IMGT000082 TRAV1*02 F V-REGION gDNA --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- M22604 TRAV1*02 F V-REGION gDNA --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- ___CDR3-IMGT____ 99 100 101 102 103 104 105 106 107 S A S Y L C A V R AF259072 TRAV1*01 F V-REGION gDNA tct gcc tca tac ctc tgt gct gtg agg ga AE007512 TRAV1*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- -- AE008683 TRAV1*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- -- IMGT000082 TRAV1*02 F V-REGION gDNA --- --- --- --- --- --- --- --- --- -- M22604 TRAV1*02 F V-REGION gDNA --- --- --- --- --- --- --- --- ---
This alignment of allele is generated by IMGT/OutilAllele (Mehdi Yousfi, Chantal Ginestoux, Perrine Pégorier and Patrice Duroux).
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