IMGT Repertoire (IG and TR)

Alignment of alleles: house mouse (Mus musculus) TRAV15D-1_DV6D-1 and TRAV15-1_DV6-1

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).
Dots indicate gaps according to the IMGT unique numbering.
Blanks at the 5' and/or 3' end indicate partial sequences.
Asterisk (*) in the sequence indicate a STOP-CODON.
Letters in red correspond to amino acids which are polymorphic in the other alleles.
Colours are according to Color menu for mutations, Color menu for sequence alignments and Color menu for splicing types.
The nucleotide (s) in bold and colored in purple (splicing frame 1) or green (splicing frame 2) from the DONOR splice site are added at the beginning of the following exon in order to obtain and to complete the first CODON of the DOMAIN or REGION resulting from the splicing site. These first CODONs are in bold and colored in purple (splicing frame 1) or green (splicing frame 2)
N (Asn, asparagine) of potential N-glycosylation sites (NXS/T, where X is different from P), (N-linked glycosylation) is shown in green
Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.
                                                                                                                                       
                                                       
                                                        1   2   3   4   5   6   7   8   8A  9   10  11  12  13  14  15  16  17  18  19 
                                                        A   Q   K   V   I   Q   V   W       S   T   T   S   R   Q   E   G   E   K   L  
  AC004406   TRAV15-1/DV6-1*01   F   V-REGION gDNA     gcc cag aaa gtg att cag gtc tgg ... tca aca aca agc agg cag gag ggc gaa aaa ctc 

                                                                                                                                       
  AE007512   TRAV15-1/DV6-1*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- 

                                                                                                                                       
  AE008685   TRAV15-1/DV6-1*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- 

                                                                                                                                       
  IMGT000082 TRAV15-1/DV6-1*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- 

                                                                                                    P                           E      
  X07878     TRAV15D-1/DV6D-1*01 F   V-REGION gDNA     --- --- --- --- --- --- --- --- ... --- --- c-- --- --- --- --- --- --- g-- --- 

                                                                                                                                       
  X63939     TRAV15-1/DV6-1*02   (F) V-REGION gDNA     --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --a --- --- --- 

                                                                                                    A                           E      
  AC005402   TRAV15D-1/DV6D-1*02 F   V-REGION gDNA     --- --- --- --- --- --- --- --- ... --- --- g-- --- --- --- --- --- --- g-- --- 

                                                                                                    A                           E      
  AE007512   TRAV15D-1/DV6D-1*02 F   V-REGION gDNA     --- --- --- --- --- --- --- --- ... --- --- g-- --- --- --- --- --- --- g-- --- 

                                                                                                    A                           E      
  AE008684   TRAV15D-1/DV6D-1*02 F   V-REGION gDNA     --- --- --- --- --- --- --- --- ... --- --- g-- --- --- --- --- --- --- g-- --- 

                                                            E                                                                          
  X17225     TRAV15D-1/DV6D-1*03 (F) V-REGION gDNA     --- g-- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- 

                                                            E                                       A                           E      
  U66666     TRAV15D-1/DV6D-1*04 (F) V-REGION cDNA         g-- --- --- --- --- --- --- ... --- --- g-- --- --- --- --- --- --- g-- --- 

                                                                            R   I                   A                           E      
  U66667     TRAV15D-1/DV6D-1*05 (F) V-REGION cDNA         --- --- --- --- -g- a-- --- ... --- --- g-- --- --- --- --- --- --- g-- --- 

                                                                                                    A                           E      
  U66668     TRAV15D-1/DV6D-1*06 (F) V-REGION cDNA         --- --- --- --- --- --- --- ... --- --- g-- --- --- --- --- --- --- g-- --- 

                                                            E                                       A                           E      
  IMGT000082 TRAV15D-1/DV6D-1*07 F   V-REGION gDNA     --- g-- --- --- --- --- --- --- ... --- --- g-- --- --- --- --- --- --- g-- --- 



                                                                                   ___________________CDR1-IMGT____________________    
                                                       
                                                        20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39 
                                                        T   L   D   C   S   Y   K   T   S   Q   V                       L   Y   H   L  
  AC004406   TRAV15-1/DV6-1*01   F   V-REGION gDNA     aca ctg gac tgt tca tat aag aca agt cag gtc ... ... ... ... ... tta tac cat ctt 

                                                                                                                                       
  AE007512   TRAV15-1/DV6-1*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- 

                                                                                                                                       
  AE008685   TRAV15-1/DV6-1*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- 

                                                                                                                                       
  IMGT000082 TRAV15-1/DV6-1*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- 

                                                                                E                                                      
  X07878     TRAV15D-1/DV6D-1*01 F   V-REGION gDNA     --c --- --- --- --- --- g-- --- --- --- --- ... ... ... ... ... --- --- --- --- 

                                                                                                                                       
  X63939     TRAV15-1/DV6-1*02   (F) V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- 

                                                                                E                                                      
  AC005402   TRAV15D-1/DV6D-1*02 F   V-REGION gDNA     --c --- --- --- --- --- g-- --- --- --- --- ... ... ... ... ... --- --- --- --- 

                                                                                E                                                      
  AE007512   TRAV15D-1/DV6D-1*02 F   V-REGION gDNA     --c --- --- --- --- --- g-- --- --- --- --- ... ... ... ... ... --- --- --- --- 

                                                                                E                                                      
  AE008684   TRAV15D-1/DV6D-1*02 F   V-REGION gDNA     --c --- --- --- --- --- g-- --- --- --- --- ... ... ... ... ... --- --- --- --- 

                                                                                                                                       
  X17225     TRAV15D-1/DV6D-1*03 (F) V-REGION gDNA     --- --- --t --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- 

                                                                                E                                                      
  U66666     TRAV15D-1/DV6D-1*04 (F) V-REGION cDNA     --c --- --- --- --- --- g-- --- --- --- --- ... ... ... ... ... --- --- --- --- 

                                                                                E       R                                              
  U66667     TRAV15D-1/DV6D-1*05 (F) V-REGION cDNA     --c --- --- --- --- --- g-- --- --a --- --- ... ... ... ... ... --- --- --- --- 

                                                                                E                                                      
  U66668     TRAV15D-1/DV6D-1*06 (F) V-REGION cDNA     --c --- --- --- --- --- g-- --- --- --- --- ... ... ... ... ... --- --- --- --- 

                                                                                E                                                      
  IMGT000082 TRAV15D-1/DV6D-1*07 F   V-REGION gDNA     --c --- --- --- --- --- g-- --- --- --- --- ... ... ... ... ... --- --- --- --- 



                                                                                                                       _______________C
                                                       
                                                        40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                        F   W   Y   K   H   L   L   S   G   E   M   V   L   L   I   R   Q   M   P   S  
  AC004406   TRAV15-1/DV6-1*01   F   V-REGION gDNA     ttc tgg tac aag cac ctt ctt agt gga gag atg gtt ttg ctt att cga caa atg cct tct 

                                                                                                                                       
  AE007512   TRAV15-1/DV6-1*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                                                                                       
  AE008685   TRAV15-1/DV6-1*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                                                                                       
  IMGT000082 TRAV15-1/DV6-1*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                                                        F                       S      
  X07878     TRAV15D-1/DV6D-1*01 F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --c --- --- --- --- --- t-- --- 

                                                                                                                                       
  X63939     TRAV15-1/DV6-1*02   (F) V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                                                        F                       S      
  AC005402   TRAV15D-1/DV6D-1*02 F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --c --- --- --- --- --- t-- --- 

                                                                                                        F                       S      
  AE007512   TRAV15D-1/DV6D-1*02 F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --c --- --- --- --- --- t-- --- 

                                                                                                        F                       S      
  AE008684   TRAV15D-1/DV6D-1*02 F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --c --- --- --- --- --- t-- --- 

                                                                                                                                       
  X17225     TRAV15D-1/DV6D-1*03 (F) V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                                                        F                   T   S      
  U66666     TRAV15D-1/DV6D-1*04 (F) V-REGION cDNA     --- --- --- --- --- --- --- --- --- --- --- --- --c --- --- --- --- -ca t-- --- 

                                                                                H                       F                   T   S      
  U66667     TRAV15D-1/DV6D-1*05 (F) V-REGION cDNA     --- --- --- --- --- --- -a- --- --- --- --- --- --c --- --- --- --- -c- t-- --- 

                                                                                                        F                   T   S      
  U66668     TRAV15D-1/DV6D-1*06 (F) V-REGION cDNA     --- --- --- --- --- --- --- --- --- --- --- --- --c --- --- --- --- -c- t-- --- 

                                                                                                        F                   T   S      
  IMGT000082 TRAV15D-1/DV6D-1*07 F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --c --- --- --- --- -c- t-- --- 



                                                       DR2-IMGT________________                                                        
                                                       
                                                        60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                                T   I   A   I   E   R   S                       G   R   Y   S   V   V  
  AC004406   TRAV15-1/DV6-1*01   F   V-REGION gDNA     ... ... act att gca ata gag agg agc ... ... ... ... ... ggc cgc tat tct gta gtc 

                                                                                                                                       
  AE007512   TRAV15-1/DV6-1*01   F   V-REGION gDNA     ... ... --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- --- --- 

                                                                                                                                       
  AE008685   TRAV15-1/DV6-1*01   F   V-REGION gDNA     ... ... --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- --- --- 

                                                                                                                                       
  IMGT000082 TRAV15-1/DV6-1*01   F   V-REGION gDNA     ... ... --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- --- --- 

                                                                S   T       K                                                          
  X07878     TRAV15D-1/DV6D-1*01 F   V-REGION gDNA     ... ... t-- -c- --- -a- --- --- --- ... ... ... ... ... --- --- --- --- --- --- 

                                                                                                                                       
  X63939     TRAV15-1/DV6-1*02   (F) V-REGION gDNA     ... ... --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- --- --- 

                                                                S   T       K                                                          
  AC005402   TRAV15D-1/DV6D-1*02 F   V-REGION gDNA     ... ... t-- -c- --- -a- --- --- --- ... ... ... ... ... --- --- --- --- --- --- 

                                                                S   T       K                                                          
  AE007512   TRAV15D-1/DV6D-1*02 F   V-REGION gDNA     ... ... t-- -c- --- -a- --- --- --- ... ... ... ... ... --- --- --- --- --- --- 

                                                                S   T       K                                                          
  AE008684   TRAV15D-1/DV6D-1*02 F   V-REGION gDNA     ... ... t-- -c- --- -a- --- --- --- ... ... ... ... ... --- --- --- --- --- --- 

                                                                                        D                                              
  X17225     TRAV15D-1/DV6D-1*03 (F) V-REGION gDNA     ... ... --- --- --- --- --- --- ga- ... ... ... ... ... --- --- --- --- --- --- 

                                                                S   T       K                                                          
  U66666     TRAV15D-1/DV6D-1*04 (F) V-REGION cDNA     ... ... t-- -c- --- -a- --- --- --- ... ... ... ... ... --- --- --- --- --- --- 

                                                                S   T       K                                                          
  U66667     TRAV15D-1/DV6D-1*05 (F) V-REGION cDNA     ... ... t-- -c- --- -a- --- --- --- ... ... ... ... ... --- --- --- --- --- --- 

                                                                S   T       K                                                          
  U66668     TRAV15D-1/DV6D-1*06 (F) V-REGION cDNA     ... ... t-- -c- --- -a- --- --- --- ... ... ... ... ... --- --- --- --- --- --- 

                                                                S   T       K                                                          
  IMGT000082 TRAV15D-1/DV6D-1*07 F   V-REGION gDNA     ... ... t-- -c- --- -a- --- --- --- ... ... ... ... ... --- --- --- --- --- --- 



                                                                                                                                       
                                                       
                                                        80  81  82  83  84 84A  85  86  87  88  89  90  91  92  93  94  95  96  97  98 
                                                        F   Q   K   S   R       K   S   I   S   L   V   I   S   T   L   Q   P   D   D  
  AC004406   TRAV15-1/DV6-1*01   F   V-REGION gDNA     ttc cag aaa tca cgc ... aaa tcc atc agc ctt gtc att tca acc tta caa cca gac gat 

                                                                                                                                       
  AE007512   TRAV15-1/DV6-1*01   F   V-REGION gDNA     --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                                                                                       
  AE008685   TRAV15-1/DV6-1*01   F   V-REGION gDNA     --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                                                                                       
  IMGT000082 TRAV15-1/DV6-1*01   F   V-REGION gDNA     --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                        L                                       A                      
  X07878     TRAV15D-1/DV6D-1*01 F   V-REGION gDNA     --- --- --- --- -t- ... --- --- --- --- --- --- --- --- g-- --- --- --- --- --- 

                                                                                                                                       
  X63939     TRAV15-1/DV6-1*02   (F) V-REGION gDNA     --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                        L                                       A                      
  AC005402   TRAV15D-1/DV6D-1*02 F   V-REGION gDNA     --- --- --- --- -t- ... --- --- --- --- --- --- --- --- g-- --- --- --- --- --- 

                                                                        L                                       A                      
  AE007512   TRAV15D-1/DV6D-1*02 F   V-REGION gDNA     --- --- --- --- -t- ... --- --- --- --- --- --- --- --- g-- --- --- --- --- --- 

                                                                        L                                       A                      
  AE008684   TRAV15D-1/DV6D-1*02 F   V-REGION gDNA     --- --- --- --- -t- ... --- --- --- --- --- --- --- --- g-- --- --- --- --- --- 

                                                                                                                                       
  X17225     TRAV15D-1/DV6D-1*03 (F) V-REGION gDNA     --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                        L                                       A                      
  U66666     TRAV15D-1/DV6D-1*04 (F) V-REGION cDNA     --- --- --- --- -t- ... --- --- --- --- --- --- --- --- g-- --- --- --- --t --- 

                                                                        L                                       A                      
  U66667     TRAV15D-1/DV6D-1*05 (F) V-REGION cDNA     --- --- --- --- -t- ... --- --- --- --- --- --- --- --- g-- --- --- --- --- --- 

                                                                        L                                       A                      
  U66668     TRAV15D-1/DV6D-1*06 (F) V-REGION cDNA     --- --- --- --- -t- ... --- --- --- --- --- --- --- --- g-- --- --- --- --- --- 

                                                                        L                           I           A                      
  IMGT000082 TRAV15D-1/DV6D-1*07 F   V-REGION gDNA     --- --- --- --- -t- ... --- --- --- --- --- a-- --- --- g-t --- --- --- --- --- 



                                                                               _______CDR3-IMGT________
                                                       
                                                        99 100 101 102 103 104 105 106 107 108 109 
                                                        S   G   K   Y   F   C   A   L   W   E   L  
  AC004406   TRAV15-1/DV6-1*01   F   V-REGION gDNA     tcg gga aag tat ttc tgt gct ctc tgg gag ctg g

                                                                                                   
  AE007512   TRAV15-1/DV6-1*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- -

                                                                                                   
  AE008685   TRAV15-1/DV6-1*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- -

                                                                                                   
  IMGT000082 TRAV15-1/DV6-1*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- -

                                                                                                   
  X07878     TRAV15D-1/DV6D-1*01 F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --c 

                                                                                                   
  X63939     TRAV15-1/DV6-1*02   (F) V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- -

                                                                                                   
  AC005402   TRAV15D-1/DV6D-1*02 F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --a -

                                                                                                   
  AE007512   TRAV15D-1/DV6D-1*02 F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --a -

                                                                                                   
  AE008684   TRAV15D-1/DV6D-1*02 F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --a -

                                                                                               
  X17225     TRAV15D-1/DV6D-1*03 (F) V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- 

                                                                                               
  U66666     TRAV15D-1/DV6D-1*04 (F) V-REGION cDNA     --- --- --- --- --- --- --- --- --- --- --

                                                                                               
  U66667     TRAV15D-1/DV6D-1*05 (F) V-REGION cDNA     --a --- --- --- --- --- --- --- --- --- --

                                                                                               
  U66668     TRAV15D-1/DV6D-1*06 (F) V-REGION cDNA     --- --- --- --- --- --- --- --- --- --- --

                                                                                                   
  IMGT000082 TRAV15D-1/DV6D-1*07 F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- -
This alignment of allele is generated by IMGT/OutilAllele (Mehdi Yousfi, Chantal Ginestoux, Perrine Pégorier and Patrice Duroux).
Created:: 05/09/2022
Last updated:: 22/09/2023
Authors:: Guilhem Zeitoun