IMGT Repertoire (IG and TR)

Alignment of alleles: house mouse (Mus musculus) TRAV15-2_DV6-2 and TRAV15D-2_DV6D-2

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).
Dots indicate gaps according to the IMGT unique numbering.
Blanks at the 5' and/or 3' end indicate partial sequences.
Asterisk (*) in the sequence indicate a STOP-CODON.
Letters in red correspond to amino acids which are polymorphic in the other alleles.
Colours are according to Color menu for mutations, Color menu for sequence alignments and Color menu for splicing types.
The nucleotide (s) in bold and colored in purple (splicing frame 1) or green (splicing frame 2) from the DONOR splice site are added at the beginning of the following exon in order to obtain and to complete the first CODON of the DOMAIN or REGION resulting from the splicing site. These first CODONs are in bold and colored in purple (splicing frame 1) or green (splicing frame 2)
N (Asn, asparagine) of potential N-glycosylation sites (NXS/T, where X is different from P), (N-linked glycosylation) is shown in green
Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.
                                                                                                                                       
                                                       
                                                        1   2   3   4   5   6   7   8   8A  9   10  11  12  13  14  15  16  17  18  19 
                                                        A   Q   K   V   T   Q   V   Q       S   T   G   S   S   Q   W   G       E   V  
  AC003997   TRAV15-2/DV6-2*01   F   V-REGION gDNA     gcc cag aaa gtg act cag gtc cag ... tca aca ggc agc agt cag tgg gga ... gaa gtc 

                                                                                                                                       
  AE007512   TRAV15-2/DV6-2*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- ... --- --- 

                                                                                                                                       
  AE008685   TRAV15-2/DV6-2*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- ... --- --- 

                                                                R                           P                               E          
  AC005402   TRAV15D-2/DV6D-2*01 F   V-REGION gDNA     --- --- -g- --- --- --- --- --- ... c-- --- --- --- --- --- --- --- gaa --- --- 

                                                                R                           P                               E          
  AE007512   TRAV15D-2/DV6D-2*01 F   V-REGION gDNA     --- --- -g- --- --- --- --- --- ... c-- --- --- --- --- --- --- --- gaa --- --- 

                                                                R                           P                               E          
  AE008684   TRAV15D-2/DV6D-2*01 F   V-REGION gDNA     --- --- -g- --- --- --- --- --- ... c-- --- --- --- --- --- --- --- gaa --- --- 

                                                                R                                                                      
  IMGT000082 TRAV15-2/DV6-2*02   F   V-REGION gDNA     --- --- -g- --- --- --- --- --- ... --- --- --- --- --- --- --- --- ... --- --- 

                                                                R                                                                      
  AF085010   TRAV15-2/DV6-2*02   F   V-REGION cDNA         --- -g- --- --- --- --- --- ... --- --- --- --- --- --- --- --- ... --- --- 

                                                                R                           P       A                       E          
  AJ271435   TRAV15D-2/DV6D-2*02 (F) V-REGION cDNA     --- --- -g- --- --- --- --- --- ... c-- --- -cg --- --- --- --- --- gaa --- --- 

                                                                R                           P                               E          
  AC163653   TRAV15D-2/DV6D-2*03 F   V-REGION gDNA     --- --- -g- --- --- --- --- --- ... c-- --- --- --- --- --- --- --- gaa --- --- 

                                                                R                           P                               E          
  AF085009   TRAV15D-2/DV6D-2*03 F   V-REGION cDNA         --- -g- --- --- --- --- --- ... c-- --- --- --- --- --- --- --- gaa --- --- 

                                                                R                           P                               E          
  IMGT000082 TRAV15D-2/DV6D-2*03 F   V-REGION gDNA     --- --- -g- --- --- --- --- --- ... c-- --- --- --- --- --- --- --- gaa --- --- 

                                                                R                                                           E          
  AF085006   TRAV15D-2/DV6D-2*04 (F) V-REGION cDNA         --- -g- --- --- --- --- --- ... --- --- --- --- --- --- --- --- gaa --- --- 

                                                                R                                                           E          
  AF085008   TRAV15D-2/DV6D-2*05 (F) V-REGION cDNA         --- -g- --- --- --- --- --- ... --- --- --- --- --- --- --- --- gaa --- --- 



                                                                                   ___________________CDR1-IMGT____________________    
                                                       
                                                        20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39 
                                                        T   L   H   C   S   Y   E   T   S   E   Y                       F   Y   V   I  
  AC003997   TRAV15-2/DV6-2*01   F   V-REGION gDNA     act ctg cac tgt tca tat gag aca agt gaa tac ... ... ... ... ... ttc tac gtt att 

                                                                                                                                       
  AE007512   TRAV15-2/DV6-2*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- 

                                                                                                                                       
  AE008685   TRAV15-2/DV6-2*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- 

                                                                D                                                               C      
  AC005402   TRAV15D-2/DV6D-2*01 F   V-REGION gDNA     --- --- g-- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- tg- --- 

                                                                D                                                               C      
  AE007512   TRAV15D-2/DV6D-2*01 F   V-REGION gDNA     --- --- g-- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- tg- --- 

                                                                D                                                               C      
  AE008684   TRAV15D-2/DV6D-2*01 F   V-REGION gDNA     --- --- g-- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- tg- --- 

                                                                D                                                       S       L      
  IMGT000082 TRAV15-2/DV6-2*02   F   V-REGION gDNA     --c --- g-- --- --- --- --- --- --- --- --- ... ... ... ... ... -c- --- c-- --- 

                                                                D                                                       S       L      
  AF085010   TRAV15-2/DV6-2*02   F   V-REGION cDNA     --c --- g-- --- --- --- --- --- --- --- --- ... ... ... ... ... -c- --- c-- --- 

                                                                D                                                               R      
  AJ271435   TRAV15D-2/DV6D-2*02 (F) V-REGION cDNA     --c --- g-- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- cg- --- 

                                                                D                                                               R      
  AC163653   TRAV15D-2/DV6D-2*03 F   V-REGION gDNA     --c --- g-- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- cg- --- 

                                                                D                                                               R      
  AF085009   TRAV15D-2/DV6D-2*03 F   V-REGION cDNA     --c --- g-- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- cg- --- 

                                                                D                                                               R      
  IMGT000082 TRAV15D-2/DV6D-2*03 F   V-REGION gDNA     --c --- g-- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- cg- --- 

                                                                D                                                               R      
  AF085006   TRAV15D-2/DV6D-2*04 (F) V-REGION cDNA     --c --- g-- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- cg- --- 

                                                                D                                                       S       L      
  AF085008   TRAV15D-2/DV6D-2*05 (F) V-REGION cDNA     --c --- g-- --- --- --- --- --- --- --- --- ... ... ... ... ... -c- --- c-- --- 



                                                                                                                       _______________C
                                                       
                                                        40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                        L   W   Y   K   Q   L   F   S   G   E   M   V   F   L   I   Y   Q   T   S   F  
  AC003997   TRAV15-2/DV6-2*01   F   V-REGION gDNA     ctt tgg tac aag cag ctt ttt agt gga gag atg gtt ttc ctt att tac caa act tcc ttt 

                                                                                                                                       
  AE007512   TRAV15-2/DV6-2*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                                                                                       
  AE008685   TRAV15-2/DV6-2*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                        I           R                                                                  
  AC005402   TRAV15D-2/DV6D-2*01 F   V-REGION gDNA     a-- --- --- -g- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                        I           R                                                                  
  AE007512   TRAV15D-2/DV6D-2*01 F   V-REGION gDNA     a-- --- --- -g- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                        I           R                                                                  
  AE008684   TRAV15D-2/DV6D-2*01 F   V-REGION gDNA     a-- --- --- -g- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                    R                                                       P          
  IMGT000082 TRAV15-2/DV6-2*02   F   V-REGION gDNA     --- --- --- -g- --- --- --- --- --- --- --- --- --- --- --- --- --- c-- --t --- 

                                                                    R                                                       P          
  AF085010   TRAV15-2/DV6-2*02   F   V-REGION cDNA     --- --- --- -g- --- --- --- --- --- --- --- --- --- --- --- --- --- c-- --t --- 

                                                        F           R                                                       P          
  AJ271435   TRAV15D-2/DV6D-2*02 (F) V-REGION cDNA     t-- --- --- -g- --- --- --- --- --- --- --- --- --- --- --- --- --- c-- --t --- 

                                                        F           R                                                       P          
  AC163653   TRAV15D-2/DV6D-2*03 F   V-REGION gDNA     t-- --- --- -g- --- --- --- --- --- --- --- --- --- --- --- --- --- c-- --t --- 

                                                        F           R                                                       P          
  AF085009   TRAV15D-2/DV6D-2*03 F   V-REGION cDNA     t-- --- --- -g- --- --- --- --- --- --- --- --- --- --- --- --- --- c-- --t --- 

                                                        F           R                                                       P          
  IMGT000082 TRAV15D-2/DV6D-2*03 F   V-REGION gDNA     t-- --- --- -g- --- --- --- --- --- --- --- --- --- --- --- --- --- c-- --t --- 

                                                        I           R                                                                  
  AF085006   TRAV15D-2/DV6D-2*04 (F) V-REGION cDNA     a-- --- --- -g- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                    R                                                       P          
  AF085008   TRAV15D-2/DV6D-2*05 (F) V-REGION cDNA     --- --- --- -g- --- --- --- --- --- --- --- --- --- --- --- --- --- c-- --t --- 



                                                       DR2-IMGT________________                                                        
                                                       
                                                        60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                                D   T   Q   N   Q   R   N                       S   R   Y   S   V   V  
  AC003997   TRAV15-2/DV6-2*01   F   V-REGION gDNA     ... ... gat act cag aac cag agg aac ... ... ... ... ... agc cgc tac tct gta gtc 

                                                                                                                                       
  AE007512   TRAV15-2/DV6-2*01   F   V-REGION gDNA     ... ... --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- --- --- 

                                                                                                                                       
  AE008685   TRAV15-2/DV6-2*01   F   V-REGION gDNA     ... ... --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- --- --- 

                                                                                                                G                      
  AC005402   TRAV15D-2/DV6D-2*01 F   V-REGION gDNA     ... ... --- --- --- --- --- --- --- ... ... ... ... ... g-- --- --- --- --- --- 

                                                                                                                G                      
  AE007512   TRAV15D-2/DV6D-2*01 F   V-REGION gDNA     ... ... --- --- --- --- --- --- --- ... ... ... ... ... g-- --- --- --- --- --- 

                                                                                                                G                      
  AE008684   TRAV15D-2/DV6D-2*01 F   V-REGION gDNA     ... ... --- --- --- --- --- --- --- ... ... ... ... ... g-- --- --- --- --- --- 

                                                                                        S                       G   H                  
  IMGT000082 TRAV15-2/DV6-2*02   F   V-REGION gDNA     ... ... --- --- --- --- --- --- -g- ... ... ... ... ... g-- -a- --- --- --- --- 

                                                                                        S                       G   H                  
  AF085010   TRAV15-2/DV6-2*02   F   V-REGION cDNA     ... ... --- --- --- --- --- --- -g- ... ... ... ... ... g-- -a- --- --- --- --- 

                                                                                        S                       G                      
  AJ271435   TRAV15D-2/DV6D-2*02 (F) V-REGION cDNA     ... ... --c --- --- --- --- --- -g- ... ... ... ... ... g-- --- --- --- --- --- 

                                                                                        S                       G                      
  AC163653   TRAV15D-2/DV6D-2*03 F   V-REGION gDNA     ... ... --c --- --- --- --- --- -g- ... ... ... ... ... g-- --- --- --- --- --- 

                                                                                        S                       G                      
  AF085009   TRAV15D-2/DV6D-2*03 F   V-REGION cDNA     ... ... --c --- --- --- --- --- -g- ... ... ... ... ... g-- --- --- --- --- --- 

                                                                                        S                       G                      
  IMGT000082 TRAV15D-2/DV6D-2*03 F   V-REGION gDNA     ... ... --c --- --- --- --- --- -g- ... ... ... ... ... g-- --- --- --- --- --- 

                                                                                        S                       G                      
  AF085006   TRAV15D-2/DV6D-2*04 (F) V-REGION cDNA     ... ... --- --- --- --- --- --- -g- ... ... ... ... ... g-- --- --- --- --- --- 

                                                                                        S                       G                      
  AF085008   TRAV15D-2/DV6D-2*05 (F) V-REGION cDNA     ... ... --- --- --- --- --- --- -g- ... ... ... ... ... g-- --- --- --- --- --- 



                                                                                                                                       
                                                       
                                                        80  81  82  83  84 84A  85  86  87  88  89  90  91  92  93  94  95  96  97  98 
                                                        F   Q   K   S   L       K   S   I   S   L   V   I   S   A   S   Q   P   E   D  
  AC003997   TRAV15-2/DV6-2*01   F   V-REGION gDNA     ttc cag aaa tca ctc ... aag tcc atc agc ctt gtc att tca gcc tca cag cca gag gat 

                                                                                                                                       
  AE007512   TRAV15-2/DV6-2*01   F   V-REGION gDNA     --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                                                                                       
  AE008685   TRAV15-2/DV6-2*01   F   V-REGION gDNA     --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                                                                                       
  AC005402   TRAV15D-2/DV6D-2*01 F   V-REGION gDNA     --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                                                                                       
  AE007512   TRAV15D-2/DV6D-2*01 F   V-REGION gDNA     --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                                                                                       
  AE008684   TRAV15D-2/DV6D-2*01 F   V-REGION gDNA     --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                        F                                                              
  IMGT000082 TRAV15-2/DV6-2*02   F   V-REGION gDNA     --- --- --- --- t-- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                        F                                                              
  AF085010   TRAV15-2/DV6-2*02   F   V-REGION cDNA     --- --- --- --- t-- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                        F                                                              
  AJ271435   TRAV15D-2/DV6D-2*02 (F) V-REGION cDNA     --- --- --- --- t-- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                        F                                                              
  AC163653   TRAV15D-2/DV6D-2*03 F   V-REGION gDNA     --- --- --- --- t-- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                        F                                                              
  AF085009   TRAV15D-2/DV6D-2*03 F   V-REGION cDNA     --- --- --- --- t-- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                        F                                                              
  IMGT000082 TRAV15D-2/DV6D-2*03 F   V-REGION gDNA     --- --- --- --- t-- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                                                                                       
  AF085006   TRAV15D-2/DV6D-2*04 (F) V-REGION cDNA     --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                        F                                                              
  AF085008   TRAV15D-2/DV6D-2*05 (F) V-REGION cDNA     --- --- --- --- t-- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 



                                                                               _______CDR3-IMGT________
                                                       
                                                        99 100 101 102 103 104 105 106 107 108 109 
                                                        S   G   T   Y   F   C   A   L   S   E   L  
  AC003997   TRAV15-2/DV6-2*01   F   V-REGION gDNA     tca ggg acg tac ttc tgc gct ctc tcg gaa ctg a

                                                                                                   
  AE007512   TRAV15-2/DV6-2*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- -

                                                                                                   
  AE008685   TRAV15-2/DV6-2*01   F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- -

                                                                                                   
  AC005402   TRAV15D-2/DV6D-2*01 F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- -

                                                                                                   
  AE007512   TRAV15D-2/DV6D-2*01 F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- -

                                                                                                   
  AE008684   TRAV15D-2/DV6D-2*01 F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- -

                                                                                                   
  IMGT000082 TRAV15-2/DV6-2*02   F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- -

                                                                                               
  AF085010   TRAV15-2/DV6-2*02   F   V-REGION cDNA     --- --- --- --- --- --- --- --- --- --- --

                                                                                               
  AJ271435   TRAV15D-2/DV6D-2*02 (F) V-REGION cDNA     --- --- --- --- --- --- --- --- --- --- -

                                                                                                   
  AC163653   TRAV15D-2/DV6D-2*03 F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- -

                                                                                               
  AF085009   TRAV15D-2/DV6D-2*03 F   V-REGION cDNA     --- --- --- --- --- --- --- --- --- --- --

                                                                                                   
  IMGT000082 TRAV15D-2/DV6D-2*03 F   V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- -

                                                                                               
  AF085006   TRAV15D-2/DV6D-2*04 (F) V-REGION cDNA     --- --- --- --- --- --- --- --- --- --- --

                                                                                               
  AF085008   TRAV15D-2/DV6D-2*05 (F) V-REGION cDNA     --- --- --- --- --- --- --- --- --- --- --
This alignment of allele is generated by IMGT/OutilAllele (Mehdi Yousfi, Chantal Ginestoux, Perrine Pégorier and Patrice Duroux).
Created:: 05/09/2022
Last updated:: 22/09/2023
Authors:: Guilhem Zeitoun