When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).
Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.
1 2 3 4 5 6 7 8 8A 9 10 11 12 13 14 15 16 17 18 19 G E Q V E Q L P S S L I V Q E G A S V AF259071 TRAV5-1*01 F V-REGION gDNA ggc gag cag gtg gaa cag ctc cct ... tcc tcc ctg att gtc cag gag gga gcc agt gtt AE007512 TRAV5-1*01 F V-REGION gDNA --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- AE008683 TRAV5-1*01 F V-REGION gDNA --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- IMGT000082 TRAV5-1*02 F V-REGION gDNA --t --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- ___________________CDR1-IMGT____________________ 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 L I N C S Y T D S A S V Y F AF259071 TRAV5-1*01 F V-REGION gDNA ctc atc aac tgc tcc tac aca gac agt gcc ... ... ... ... ... ... tct gtc tac ttc AE007512 TRAV5-1*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- --- --- --- AE008683 TRAV5-1*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- --- --- --- IMGT000082 TRAV5-1*02 F V-REGION gDNA --g --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- --- --- --- _______________C 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 P W Y K Q E P G K R L Q F I I D I R S N AF259071 TRAV5-1*01 F V-REGION gDNA cct tgg tat aag caa gag cct ggg aag cgt ctt cag ttc atc ata gac atc cgt tca aat AE007512 TRAV5-1*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- AE008683 TRAV5-1*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- IMGT000082 TRAV5-1*02 F V-REGION gDNA --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DR2-IMGT________________ 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 M E R K Q N Q R L T L L AF259071 TRAV5-1*01 F V-REGION gDNA ... ... ... atg gaa aga aaa cag aat ... ... ... ... ... caa aga ctc acc ctt tta AE007512 TRAV5-1*01 F V-REGION gDNA ... ... ... --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- --- --- AE008683 TRAV5-1*01 F V-REGION gDNA ... ... ... --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- --- --- T IMGT000082 TRAV5-1*02 F V-REGION gDNA ... ... ... --- --- --- --g --- -c- ... ... ... ... ... --- --- --- --- --- --- 80 81 82 83 84 84A 85 86 87 88 89 90 91 92 93 94 95 96 97 98 F D K K T K H L S L H I T A T Q P G D AF259071 TRAV5-1*01 F V-REGION gDNA ttt gat aag aaa acc ... aaa cac ctt tcc ctg cac att aca gcc act cag cct gga gac AE007512 TRAV5-1*01 F V-REGION gDNA --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- AE008683 TRAV5-1*01 F V-REGION gDNA --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- IMGT000082 TRAV5-1*02 F V-REGION gDNA --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- ___CDR3-IMGT____ 99 100 101 102 103 104 105 106 107 S A I Y F C S A S AF259071 TRAV5-1*01 F V-REGION gDNA tca gcc atc tac ttc tgc tca gca agt a AE007512 TRAV5-1*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- - AE008683 TRAV5-1*01 F V-REGION gDNA --- --- --- --- --- --- --- --- --- - IMGT000082 TRAV5-1*02 F V-REGION gDNA --- --- --- --- --- --- --- --- --- -
This alignment of allele is generated by IMGT/OutilAllele (Mehdi Yousfi, Chantal Ginestoux, Perrine Pégorier and Patrice Duroux).
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