Table of alleles: Rainbow trout (Oncorhynchus mykiss) TRBV

Functionality is shown between:
- parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
- brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

The IMGT allele table refers to the V-REGION polymorphism. It does not include polymorphisms in the other parts of the V-GENE. V-REGION alleles are only described for genes which have at least one Functional or ORF allele. The accession number of a reference sequence is given for each allele.
Nucleotide mutations and amino acid changes in CDR3-IMGT of rearranged sequences are not taken into account for the description of polymorphism.

Click on a gene name to get the alignment of the corresponding V-REGION alleles.
Click on an accession number to get the sequence and additional information (IMGT annotations, IMGT flat file, Coding regions...).

gene name
allele name
by genetics
and/or data
Description of mutations
TRBV1 TRBV1S1 (F) TRBV1S1*01 U18123    
TRBV1S2 (F) TRBV1S2*01 AJ517910    
TRBV1S3 (F) TRBV1S3*01 AJ517915    
TRBV1S4 (F) TRBV1S4*01 AJ517917    
TRBV1S5 (F) TRBV1S5*01 AJ517919    
TRBV2 TRBV2S1 (F) TRBV2S1*01 U18124    
TRBV2S2 [P] TRBV2S2*01 AF329703    
TRBV2S3 [F] TRBV2S3*01 AF329705 +  
TRBV2S4 [F] TRBV2S4*01 AF329708    
TRBV2S5 [F] TRBV2S5*01 AF329713    
TRBV2S6 [F] TRBV2S6*01 AF329704    
TRBV2S7 [F] TRBV2S7*01 AF329718    
TRBV2S8 [F] TRBV2S8*01 AF329714    
TRBV2S9 [F] TRBV2S9*01 AF329710    
TRBV2S10 [F] TRBV2S10*01 AF329719    
TRBV2S11 [P] TRBV2S11*01 AF329723    
TRBV2S12 (F) TRBV2S12*01 AF329722    
TRBV2S13 (F) TRBV2S13*01 AF329700    
TRBV2S14 [F] TRBV2S14*01 AF329706    
TRBV2S15 (P) TRBV2S15*01 AF329716    
TRBV2S16 [F] TRBV2S16*01 AF329717 +  
TRBV2S17 [F] TRBV2S17*01 AF329702    
TRBV2S18 [F] TRBV2S18*01 AF329725    
TRBV2S19 [F] TRBV2S19*01 AF329707    
TRBV2S20 [F] TRBV2S20*01 AF329720    
TRBV2S21 [P] TRBV2S21*01 AF329724    
TRBV2S23 [F] TRBV2S23*01 AF329726    
TRBV2S24 [F] TRBV2S24*01 AF329711    
TRBV2S25 [ORF] TRBV2S25*01 AF329712    
TRBV2S26 [P] TRBV2S26*01 AF329721    
TRBV2S27 (F) TRBV2S27*01 AJ517925    
TRBV3 TRBV3S1 (F) TRBV3S1*01 U18125    
TRBV3S2 (F) TRBV3S2*01 AJ517930    
TRBV4 TRBV4S1 (F) TRBV4S1*01 AY135385    
TRBV5 TRBV5S1 (F) TRBV5S1*01 AY135386    
TRBV6 TRBV6S1 (F) TRBV6S1*01 AY135387 +  
TRBV7 TRBV7S1 (F) TRBV7S1*01 AY135389    
TRBV7S2 (F) TRBV7S2*01 AJ517966    
TRBV7S3 (F) TRBV7S3*01 AJ517967    
TRBV7S4 (F) TRBV7S4*01 AJ517968    
TRBV8 TRBV8S1 (F) TRBV8S1*01 AY135390    
TRBV8S2 (F) TRBV8S2*01 AJ517978    
TRBV8S3 (F) TRBV8S3*01 AJ517980    
TRBV9 TRBV9S1 (F) TRBV9S1*01 AY135391    
TRBV10 TRBV10S1 (F) TRBV10S1*01 AY135392    

Created: 06/11/2002
Author: Géraldine Folch