Table of alleles: Atlantic salmon (Salmo salar) IGIJ

IMGT numbering and description of alleles for germline J-REGIONs start with the first nucleotide of the first codon. The accession number of a reference sequence is given for each allele.

Click on a gene name to get the alignment of the corresponding J-REGION alleles.
Click on an accession number to get the sequence and additional information (IMGT annotations, IMGT flat file, Coding regions...).

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.

gene name
allele name
Accession number Confirmed
by genetics
and /or data
Description of mutations
IGIJ1S1 (F) IGIJ1S1*01 AF273012    
IGIJ1S2 (F) IGIJ1S2*01 AF273013    
IGIJ1S3 (F) IGIJ1S3*01 AF273014    
IGIJ1S4 (ORF) IGIJ1S4*01 AF273015    
IGIJ1S5 F IGIJ1S5*01 AF273016    
IGIJ1S6 (F) IGIJ1S6*01 AF273017    
IGIJ1S7 (F) IGIJ1S7*01 AF273019    
IGIJ1S8 (ORF) IGIJ1S8*01 AF273020    
IGIJ1S9 (F) IGIJ1S9*01 AF273021    
IGIJ1S10 (ORF) IGIJ1S10*01 AF273018    
IGIJ1S11 (F) IGIJ1S11*01 AF406956    
IGIJ1S12 (F) IGIJ1S12*01 AF406957    
IGIJ1S13 (F) IGIJ1S13*01 AF406958    
IGIJ2S1 F IGIJ2S1*01 AF297518    
IGIJ2S2 (F) IGIJ2S2*01 AF406964    

Created: 06/06/2003
Author: Nathalie Bosc