IMGT Repertoire (IG and TR)

List of the mouse strains in IMGT Repertoire

Links to MGI mouse strain individual entries are provided in Gene tables and Tables of alleles (IMGT Repertoire).
Click here for Mouse strain H2 haplotypes.

1 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

129 (129 nomenclature - revisited June 2001, JAX® Mice)
129P2/OlaHsd inbred strain, MGI:2164147, synonyms: 129/OlaHsd, 129P2
129P3/J, synonym: 129/J
129/Sv, inbred strain
129S5/SvEvBrd, inbred strain
129S1/SvImJ, inbred strain
129X1/SvJ, inbred strain, synonyms: 129/Sv, 129X1

A strain family
A/HeJ
ABH (JAX:027904, ABH/BiozDbakJ[cc], also Known as: ABH/QMUL, Biozzi), synonym : AB/H antibody high These inbred mice carry the H2 ^dq1 MHC haplotype as well as the mouse I-A^g7 MHC class II molecule found in NOD inbred mice. This strain is used for studying the experimental autoimmune encephalomyelitis (EAE) model of multiple sclerosis (MS) and is susceptible to induced autoimmunities. black and tan, brachyury (BTBR) T+ Itpr3tf/J mouse strain displays a behavioral phenotype with Autism spectrum disorders (ASD)-like features. Daimon et al. Front Physiol. 2015; 6: 324. PMID: 26635614
A/J
AKR strain family
AKR/J, inbred
ALR, strain family, synonym: alloxan resistance
ALR/LtJ
ALS, strain family, synonym: alloxan susceptibility
ALS/LtJ

B6 abbreviated symbol of C57BL/6
B6.lambdaSEG (almost congenic strain carrying of 2% of SEG/Pas genome in a C57BL/6J background)
B6.Cg-Foxn1^nu congenic, mutant strain, spontaneous mutation, Synonyms: C57BL/6 nude
B10 abbreviated symbol of C57BL/10, strain family
BALB, strain family
BALB/c
BALB/cByJ
BALB/cJ
BALB.K-H2^k, major histocompatibility congenic, mutant strain
BALB/c nude, Charles River, Nomenclature CAnN.Cg-Foxn1^nu/Crl
BIK M. m. domesticus, wild
BTBR strain family
BTBR T+ Itpr3^tf/J inbred strain, mutant strain, MGI:2162761, Synonyms: BTBR T+ tf/J
BUB
BUB/BnJ

C strain family
C.B17 (also CB-17 in literature) (a congenic line with IGH locus of C57BL/Ka (Igh^b) on BALB/c (Igh^a) background, but with the unexpected presence of IgH^a. Reference: Bosma, M.J. and Bosma, G.C., J. Exp. Med., 139, 512-527 (1974)).
C.B20 (also CB.20 in the literature) (a congenic line with IGH locus of C57BL/Ka (Igh^b) on BALB/c (Igh^a) background)
C.C3-H2^k/LilMcdJ major histocompatibility congenic, mutant strain, synonyms : BALB.K
C3H strain family
C3H/HeJ, inbred strain
C3H/HeH, inbred strain
C57BL strain family
C57BL/6 strain family, synonyms: B6, Black 6
C57BL/6ByJ, synonyms: B6 Bailey, Black 6 Bailey
C57BL/6J
C57BL/6NJ, inbred strain, MGI:3056279, Synonyms: B6N, Black 6N, C57BL/6NCrJ
C57BL/10, strain family
C57BL/10A, abbrev B10.A
C57BL/10J (synonyms: B10, Black 10)
C57BL/Ka
C57BLKS/J
C57BR, strain family, synonyms: C57 brown
C57BR/cdJ
C57L strain family, MGI:2159840, Synonyms: C57 leaden, Leaden
C57L/J, inbred strain, MGI:2159746, Synonyms: C57 leaden, Leaden
C58 strain family
C58/J
CAST (Mus musculus castaneus) strain family
CAST/EiJ (Mus musculus castaneus) WDIS dbSNP (synonym: Castaneus Eicher)
CBA strain family
CBA/J
CE strain family
CE/J
CI27
CIM M. m. castaneus WDIS
CZECHII/EiJ M. m. musculus WDIS

DBA/1, strain family, Synonyms: D1
DBA/1J, inbred strain, Synonyms : D1, DBA1
DBA/2 strain family
DBA/2J
DDO M. m. domesticus, wild
DDY
DGA M. m. domesticus, wild, synonyms: Batumi, Adjara, Georgia
DJO M. m. domesticus, wild
DMZ M. m. domesticus, wild

FVB strain family, MGI:3609372
FVB/NJ, Synonyms : Friend Virus B NIH Jackson, FVB

HRS strain family
HRS/J, Synonyms: Hairless

I/St (synonym: I Strong)

KK strain family, MGI:2160128, synonyms: Kasukabe
KK/HIJ inbred strain, MGI:2161953, synonyms: Kasukabe

LEWES/EiJ M. m. domesticus WDIS, dbSNP
L strain family
L/J, inbred strain
LP strain family
LP/J, inbred strain, MGI:2159761, synonyms : LP

MAI M. m. musculus, strain family, WDIS from Austria
MBK M. m. musculus, strain family, WDIS from Bulgaria
MGA M. m. musculus, wild
MOLF/EiJ M. m. molossinus, WDIS, dbSNP (natural hybrid species between M. m. castaneus and M. m. musculus (Yonekawa et al. 1986; Yonekawa et al. 1988), however a majority of its genome is derived from M. m. musculus)
MOR/Rk, inbred strain, wild-derived
MPR, wild, M. m. musculus
MRL strain family
MRL/Fas^lpr
MRL/MpJ
MRL/MpJ-Fas^lpr

NFS strain family
NOD strain family
NOD/ShiLtJ, inbred strain, MGI:2162056, synonyms: NOD/Lt, Non-obese Diabetic
NON strain family
NON//ShiLtJ, inbred strain, MGI:2163530, synonyms: NON/LtJ, Non-obese Non-diabetic
NOR1/Lt
NU/J, inbred strain, spontaneous mutation, synonyms: athymic nude
NZB strain family
NZB strain family
NZB/BINJ, synonyms : New Zealand Black
NZO strain family
NZO/HILtJ, synonyms : New Zealand Black
NZW strain family
NZW/LacJ inbred

O20/A

PERA strain family
PERA/EiJ inbred strain, wild-derived
PERU strain family
PL strain family
PL/J
(PL/J x SJL/J)F1/J
PWD strain family, M. m. musculus WDIS
PWD/PhJ M. m. musculus WDIS, dbSNP
PWK strain family, M. m. musculus WDIS from Czech republic
PWK/PhJ M. m. musculus WDIS

RF strain family
RF/J inbred
RIII strain family

SEA strain family
SEA/GnJ, mutant strain, recombinant inbred (RI), spontaneous mutation, Synonyms: sea Green
SEG Mus spretus, WDIS, strain family originating in Granada, Spain, characterized by a deficiency in serum Ig-Light-Lambda1 expression
SEG/Pas
SFM Mus spretus, WDIS, Montpellier Resource
SPE (Mus spretus) (lost strain)
SPRET/EiJ Mus spretus, WDIS, dbSNP
SJL strain family
SJL/J
SK
SMZ, Mus spretus, wild-derived strain from France
ST/bJ, inbred
STF, Mus spretus, WIS from Tunisia
SWR
SWR/J

TEH M. m. musculus, wild

WLA M. m. domesticus, strain family, WDIS
WLA/Pas M. m. domesticus, WDIS
WMP , M. m. domesticus, WDIS
WMP/Pas , M. m. domesticus, WDIS, synonym: 22MO Wild mice (Mus m domesticus) trapped in Monastir (Tunisia) by G Lefranc in 1980 and maintained by J-L Guenet, at the Institut Pasteur by sib mating. Homozygous for nine pairs of metacentric chromosomes. Said K, et al., Robertsonian house mouse populations in Tunisia: a karyological and biochemical study. Genetica. 1986;68:151-6
WSB/Ei (synonym: Watkin Star Line B) M. m. domesticus WDIS
WSB/EiJ M. m. domesticus WDIS, dbSNP (synonym: Watkin Star line B)

ZALENDE/EiJ M. m. domesticus WDIS, dbSNP

The nomenclature rules from the International Committee for Standardized Nomenclature for Mice state the following: "Most laboratory mice have contributions from both Mus musculus musculus and Mus musculus domesticus. There is evidence that smaller contributions may also have come from Mus musculus molossinus and Mus musculus castaneus. Therefore, they should not be referred to by species name, but rather as "laboratory mice" or by use of a specific strain or stock name. In addition, some recently developed laboratory mouse strains are derived wholly from other Mus species or subspecies, such as Mus spretus." Information communicated by Janan Eppig, MGI (28/03/2002).

IMGT Repertoire (IG and TR)

Taxonomy

List of the mouse strains in IMGT Repertoire