- Fct: FUNCTIONALITY
- R: Rearranged
- T: Transcribed
- Pr: Translated into protein
"+" or "-" indicates if the gene sequences have been found (+) or not been found (-)
rearranged (R),
transcribed (T) and/or translated into protein
(Pr). Arbitrarily that information is shown on the first line of each gene
when the data have been confirmed by several studies.
Functionality is shown between parentheses, (F) and (P), when the accession
number refers to rearranged genomic DNA or cDNA and the corresponding germline
gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number
refers to genomic DNA, but not known as being germline or rearranged.
Click on:
- IMGT gene name to get the corresponding IMGT/GENE-DB entry,
- IMGT allele name to see the corresponding Alignments of alleles,
- accession number to get the corresponding IMGT/LIGM-DB entry.
#c: rearranged cDNA
IMGT notes:
- (1) V-REGION is partial in 3': AA 77 to 104 are missing (partial FR3-IMGT).
- (2) V-REGION is partial in 5': AA 1 to 52 are missing (partial FR2-IMGT).
- (3) V-REGION is partial in 5': partial FR1-IMGT.
- (4) V-REGION is partial in 5': AA 1 to 69 are missing (partial FR1-IMGT, CDR1-IMGT, FR2-IMGT, CDR2-IMGT and FR3-IMGT).
- (5) V-REGION is partial in 5': AA 1 to 76 are missing (partial FR1-IMGT, CDR1-IMGT, FR2-IMGT, CDR2-IMGT and FR3-IMGT).
- (6) V-REGION is partial in 5': AA 1 to 38 are missing (partial FR1-IMGT, CDR1-IMGT).
- (7) V-REGION is partial in 5': AA 1 to 81 are missing (partial FR1-IMGT, CDR1-IMGT, FR2-IMGT, CDR2-IMGT and FR3-IMGT).
- (8) V-REGION is partial in 5': AA 1 to 43 are missing (partial FR1-IMGT, CDR1-IMGT, FR2-IMGT).
- (9) V-REGION is partial in 5': AA 1 to 20 are missing (partial FR1-IMGT).
- (10) The CONSERVED-TRP is replaced by HIS.
IMGT references:
- [1] Yamawaki-Kataoka Y. and Honjo, T., Nucleic Acid Res., 15, 5888-5888 (1987). PMID:3112743
- [2] Haire R.N., Unpublished.
- [3] Wilson M. et al., EMBO J., 11, 4337-4347 (1992). PMID:1425571
- [4] Hsu E. et al., Proc. Natl. Acad. Sci., USA, 86, 8010-8014 (1989). PMID:2510156
- [5] Haire R.N. et al., J. Exp. Med., 171, 1721-1737 (1989). PMID:2110243
See also (IMGT Scientific chart):
- Created:
- 17/07/2003
- Last updated:
- 22/09/2023
- Authors:
- Delphine Guiraudou