IMGT Repertoire (IG and TR)

Fct: FUNCTIONALITY
- F: Functional
- P: Pseudogene
- ORF: Open Reading Frame
T: Transcribed
Pr: Translated into protein

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

Click on:

IMGT gene name to get the corresponding IMGT/GENE-DB entry,
IMGT allele name to see the corresponding Alignments of alleles,
accession number to get the corresponding IMGT/LIGM-DB entry.

IMGT gene name				IMGT allele name				Fct				Chromosomal localization				T				Pr				IMGT/LIGM-DB locus reference sequences																								IMGT/LIGM-DB sequences from the literature
IMGT gene name				IMGT allele name				Fct				Chromosomal localization				T				Pr				Isolate				Clone names				Exons				Accession numbers				Positions in the sequence				Secondary accession numbers				Isolate				Clone names				Accession numbers				Positions in the sequence
				IGKC				IGKC*01				F								2A												AG05252				NC_072374.1				C-REGION								IMGT000146			MAP	780867..781186

MAP: mapped sequences.

More information:

See also (IMGT Scientific chart):

Created:: 20/07/2023
Last updated:: 22/09/2023
Authors:: Shamsa Batool

IMGT Repertoire (IG and TR)

Gene table: Bornean orangutan (Pongo pygmaeus) IGKC