IMGT Repertoire (IG and TR)


Gene table: Crab-eating macaque (Macaca fascicularis) TRBJ

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

Click on:

IMGT gene name IMGT allele name Fct Chromosomal
localization
R T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Isolate Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)
Secondary accession numbers Isolate Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)
TRBJ1-1 TRBJ1-1*01 F 3 CM001921.1 IMGT000075 MAP 707446..707521
TRBJ1-2 TRBJ1-2*01 F 3 CM001921.1 IMGT000075 MAP 707580..707655
TRBJ1-3 TRBJ1-3*01 F 3 CM001921.1 IMGT000075 MAP 708199..708276
TRBJ1-4 TRBJ1-4*01 F 3 CM001921.1 IMGT000075 MAP 708787..708865
TRBJ1-5 TRBJ1-5*01 F 3 CM001921.1 IMGT000075 MAP 709058..709135
TRBJ1-6 TRBJ1-6*01 F 3 CM001921.1 IMGT000075 MAP 709547..709627
TRBJ2-1 TRBJ2-1*01 F 3 CM001921.1 IMGT000075 MAP 716942..717019
TRBJ2-2 TRBJ2-2*01 F 3 CM001921.1 IMGT000075 MAP 717137..717215
TRBJ2-2P TRBJ2-2P*01 ORF (1) 3 CM001921.1 IMGT000075 MAP 717274..717347
TRBJ2-3 TRBJ2-3*01 F 3 CM001921.1 IMGT000075 MAP 717424..717500
TRBJ2-4 TRBJ2-4*01 F 3 CM001921.1 IMGT000075 MAP 717560..717636
TRBJ2-5 TRBJ2-5*01 F 3 CM001921.1 IMGT000075 MAP 717680..717755
TRBJ2-6 TRBJ2-6*01 F 3 CM001921.1 IMGT000075 MAP 717800..717880
TRBJ2-7 TRBJ2-7*01 F 3 CM001921.1 IMGT000075 MAP 718014..718088

MAP: Mapped reference sequences.

IMGT notes:
  1. (1) noncanonical J-MOTIF, noncanonical J-NONAMER.
Created:
15/07/2020
Last updated:
22/09/2023
Authors:
Joumana Jabado-Michaloud