IMGT Repertoire (IG and TR)

Gene table: Naked mole-rat (Heterocephalus glaber) TRAC

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT gene name IMGT allele name Fct Chromosomal
T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Isolate Clone names Exons Accession numbers Positions in the sequence Secondary accession numbers Isolate Clone names Accession numbers Positions in the sequence
TRAC TRAC TRAC*01 F MEF-2018 RPGA01000024.1 EX1 IMGT000071 1748531..1748803
EX2 IMGT000071 1749518..1749562
EX3 IMGT000071 1750356..1750463
EX4UTR (1) IMGT0000071 1751081..1751608

Provisional nomenclature (scaffolds only, no chromosome assembly).

IMGT notes:
  1. (1) Since EX4 is untranslated, nucleotide differences observed in EX4 are not taken into account for the description of alleles
Last updated:
Maria Georga