IMGT Repertoire (IG and TR)

Fct: FUNCTIONALITY
- F: Functional
- P: Pseudogene
- ORF: Open Reading Frame
T: Transcribed
Pr: Translated into protein

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

Click on:

IMGT gene name to get the corresponding IMGT/GENE-DB entry,
IMGT allele name to see the corresponding Alignments of alleles,
accession number to get the corresponding IMGT/LIGM-DB entry.

**Provisional nomenclature (scaffolds only, no chromosome assembly).**
IMGT gene name	IMGT allele name	Fct	Chromosomal localization	T	Pr	IMGT/LIGM-DB locus reference sequences						IMGT/LIGM-DB sequences from the literature
IMGT gene name	IMGT allele name	Fct	Chromosomal localization	T	Pr	Isolate	Clone names	Exons	Accession numbers	Positions in the sequence	Secondary accession numbers	Isolate	Clone names	Accession numbers	Positions in the sequence
TRDC	TRDC	TRDC*01	F						MEF-2018	RPGA01000024.1	EX1	IMGT000071	1662238..1662516
											EX2	IMGT000071	1663075..1663140
											EX3	IMGT000071	1663501..1663614
											EX4UTR	IMGT000071	1665005..1666056

IMGT notes:

More information:

See also (IMGT Scientific chart):

Created:: 07/07/2021
Last updated:: 22/09/2023
Authors:: Maria Georga

IMGT Repertoire (IG and TR)

Gene table: Naked mole-rat (Heterocephalus glaber) TRDC