IMGT Repertoire (IG and TR)

Fct: FUNCTIONALITY
- F: Functional
- P: Pseudogene
- ORF: Open Reading Frame
T: Transcribed
Pr: Translated into protein

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

Click on:

IMGT gene name to get the corresponding IMGT/GENE-DB entry,
IMGT allele name to see the corresponding Alignments of alleles,
accession number to get the corresponding IMGT/LIGM-DB entry.

IMGT gene name	IMGT allele name	Fct	Chromosomal localization	T	Pr	Positions in the locus	IMGT/LIGM-DB reference sequences						IMGT/LIGM-DB sequences from the literature
IMGT gene name	IMGT allele name	Fct	Chromosomal localization	T	Pr	Positions in the locus	Breed	Clone names	Accession numbers	Positions in the sequence	Secondary accession numbers		Breed		Clone names	Accession numbers	Positions in the sequence
	IGKC	IGKC*01	F	3q12-q14							CH242-227G10	MAP	FP312898	[1]
	IGKC	IGKC*02	F	3q12-q14							CH242-221I5	MAP	CU694848	[1]

MAP: Mapped reference sequences.

IMGT references:

[1] Schwartz J.C. et al.,Immunogenetics, 64, 303-311 (2012). PMID:22109540

See also (IMGT Scientific chart):

Created:: 2/03/2013
Last updated:: 22/09/2023
Authors:: Joumana Jabado-Michaloud

IMGT Repertoire (IG and TR)

Gene table: pig (Sus scrofa) IGKC