IMGT Repertoire (IG and TR)


Gene table: pig (Sus scrofa) TRBD

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT subgroup IMGT gene name IMGT allele name Fct Chromosomal
localization
R T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Breed Clone names Accession numbers Positions in the sequence
(D-GENE-UNIT)
Secondary accession numbers Breed Clone names Accession numbers Positions in the sequence
(D-GENE-UNIT)
TRBD1 TRBD1 TRBD1*01 F 18 Duroc CM000829.5 IMGT000039 [1] MAP 356137..356217
TRBD2 TRBD2 TRBD2*01 F 18 Duroc CM000829.5 IMGT000039 [1] MAP 377148..377230
TRBD3 TRBD3 TRBD3*01 F 18 Duroc CM000829.5 IMGT000039 [1] MAP 366832..366915

MAP: Mapped reference sequences.

IMGT notes:
IMGT references:
  1. [1] Massari S. et al., Front. Immunol. (2018).
Created:
06/02/2019
Last updated:
22/09/2023
Authors:
Imène Chentli