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"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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See Correspondence between nomenclatures: Teleostei IGIC.
Present data do not permit to determine if the sequence comes from different genes, or from different alleles of the same genes.

IMGT gene name IMGT allele name Fct T Pr Positions in the locus IMGT/LIGM-DB reference sequences IMGT/LIGM-DB sequences from the literature
Strain Clone names Exons Accession numbers Positions in the sequence Secondary accession numbers Strain Clone names Accession numbers Positions in the sequence
IGIC1S1 IGIC1S1*01 F IGIC1E2 AJ251651 [3]
IGIC1S2 IGIC1S2*01 F rtSg 9 X68522 [1] c(st)
IGIC1S3 IGIC1S3*01 F rtSg 4 X68520 [1] (1) c(st)
IGIC1S4 IGIC1S4*01 (F) rtSg E X65260 [1] c
IGIC1S5 IGIC1S5*01 (F) rtSg 10 X68517 [1] c
IGIC1S6 IGIC1S6*01 (F) rtSg 3 X68519 [1] c
IGIC1S7 IGIC1S7*01 (F) rtSg 6 X68521 [1] c
IGIC1S8 IGIC1S8*01 (F) rtSg 2 X68518 [1] (2) c
IGIC2S1 IGIC2S1*01 F IGIC1C31-2 AJ251648 [3]
IGIC2S2 IGIC2S2*01 F IGIC2C31-2 AJ251648 [3] (3)
IGIC2S3 IGIC2S3*01 (F) VL2a U69987 [2] c

c: cDNA sequence.
(st): sterile transcript.

IMGT notes:
  1. (1) Partial C-REGION: 117 nucleotides are missing in 3'.
  2. (2) Partial C-REGION: 55 nucleotides are missing in 5'.
  3. (3) Partial C-REGION: 45 nucleotides are missing in 3'.
IMGT references:
  1. [1] Daggfeldt A. et al., Immunogenetics, 38, 199-209 (1993). PMID:8505063
  2. [2] Partula S. et al., Immunogenetics, 45, 44-51 (1996). PMID:8881036
  3. [3] Timmusk S. et al., Immunogenetics, 51, 905-914 (2000). PMID:11003384
Last updated:
Sylvaine Artero, Nathalie Bosc