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"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT subgroup IMGT gene name IMGT allele name Fct Chromosomal
localization		 R T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Isolate Clone names Accession numbers Positions in the sequence
(D-GENE-UNIT)		 Secondary accession numbers Isolate Clone names Accession numbers Positions in the sequence
(D-GENE-UNIT)
IGHD1 IGHD1-1 IGHD1-1*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1612274..1612346 17573 CM000293.1 NW_001121239 complement(25082..25154)
rheMacS_CGG.01 CM017744.1 IMGT000099 2130035..2130107
IGHD1-1-1 IGHD1-1-1*01 F 7 + + 17573 CM000293.1, IGHD1-2*01 NW_001121239 (1) complement(23135..23207) RUp15 SBKD01000511 61369..61441
IGHD1-7 IGHD1-7*01 F 7 AG07107 CM014342.1 IMGT000064 MAP 1622381..1622453
IGHD1-7*02 F 7 + + 17573 CM000293.1, IGHD1-3*01 NW_001121239 complement(14607..14679) RUp15 SBKD01000511 71472..71544
IGHD1-7*03 F 7 rheMacS_CGG.01 CM017744.1 IMGT000099 2140224..2140296
IGHD1-14 IGHD1-14*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1631928..1632000 17573 CM000293.1, IGHD1-4*01 NW_001121239 complement(4464..4536)
rheMacS_CGG.01 CM017744.1 IMGT000099 2149769..2149841
RUp15 SBKD01000511 81014..81086
IGHD1-20 IGHD1-20*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1642354..1642426 rheMacS_CGG.01 CM017744.1 IMGT000099 2160295..2160367
IGHD1-20*02 F 7 + + RUp15 SBKD01000511 91518..91590
IGHD1-26 IGHD1-26*01 F (3) 7 + + AG07107 CM014342.1 IMGT000064 MAP 1653038..1653110 17573 CM000293.1, IGHD1-5*01 NW_001121238 complement(262315..262387)
rheMacS_CGG.01 CM017744.1 IMGT000099 2171017..2171089
RUp15 SBKD01000511 102210..102282
IGHD1-32 IGHD1-32*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1663081..1663153 17573 CM000293.1, IGHD1-6*01 NW_001121238 complement(251705..251777)
CM017744.1 IMGT000099 2181137..2181209
RUp15 SBKD01000511 112288..112360
IGHD1-38 IGHD1-38*01 F (4) 7 + + AG07107 CM014342.1 IMGT000064 MAP 1672019..1672091 17573 CM000293.1, IGHD1-7*01 NW_001121238 complement(242771..242843)
rheMacS_CGG.01 CM017744.1 IMGT000099 2190070..2190142
RUp15 SBKD01000511 121202..121274
IGHD1-44 IGHD1-44*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1681380..1681455
IGHD1-44*02 F 7 + + 17573 CM000293.1, IGHD1-8*01 NW_001121238 complement(232907..232982) rheMacS_CGG.01 CM017744.1 IMGT000099 2199958..2200033
RUp15 SBKD01000511 131067..131142
IGHD2 IGHD2-2 IGHD2-2*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1614953..1615039 17573 CM000293.1, IGHD2-1*01 NW_001121239 complement(20409..20495)
rheMacS_CGG.01 CM017744.1 IMGT000099 2132767..2132853
RUp15 SBKD01000511 64049..64135
IGHD2-8 IGHD2-8*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1625009..1627552 17573 CM000293.1, IGHD2-2*01 NW_001121239 complement(11670..11756)
rheMacS_CGG.01 CM017744.1 IMGT000099 2142850..2142936
RUp15 SBKD01000511 74096..74182
IGHD2-15 IGHD2-15*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1634592..1634678 17573 CM000293.1, IGHD2-3*01 NW_001121239 complement(1755..1841)
rheMacS_CGG.01 CM017744.1 IMGT000099 2152524..2152610
RUp15 SBKD01000511 83767..83853
IGHD2-21 IGHD2-21*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1645731..1645817
IGHD2-21*02 F 7 + + rheMacS_CGG.01 CM017744.1 IMGT000099 2163700..2163786 RUp15 SBKD01000511 94894..94980
IGHD2-27 IGHD2-27*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1655717..1655803 17573 CM000293.1, IGHD2-4*01 NW_001121238 complement(259027..259113)
rheMacS_CGG.01 CM017744.1 IMGT000099 2173764..2173850
RUp15 SBKD01000511 104928..105014
IGHD2-33 IGHD2-33*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1665186..1665272 17573 CM000293.1, IGHD2-5*01 NW_001121238 complement(249585..249671)
rheMacS_CGG.01 CM017744.1 IMGT000099 2183243..2183329
RUp15 SBKD01000511 114394..114480
IGHD2-39 IGHD2-39*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1674682..1674768 RUp15 SBKD01000511 123859..123945
IGHD2-39*02 F 7 + + 17573 CM000293.1, IGHD2-6*01 NW_001121238 complement(240121..240207) rheMacS_CGG.01 CM017744.1 IMGT000099 2192733..2192819
IGHD3 IGHD3-3 IGHD3-3*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1617398..1617484
IGHD3-3*02 F 7 + + rheMacS_CGG.01 CM017744.1 IMGT000099 2135216..2135302
IGHD3-3*03 F 7 + + RUp15 SBKD01000511 66494..66580
IGHD3-9 IGHD3-9*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1627463..1627552 17573 CM000293.1, IGHD3-1*01 NW_001121239 complement(8935..9024)
rheMacS_CGG.01 CM017744.1 IMGT000099 2145304..2145393
RUp15 SBKD01000511 76549..76638
IGHD3-16 IGHD3-16*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1637004..1637087 rheMacS_CGG.01 CM017744.1 IMGT000099 2154936..2155019
RUp15 SBKD01000511 86179..86262
IGHD3-22 IGHD3-22*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1648115..1648192
IGHD3-22*02 F 7 + + rheMacS_CGG.01 CM017744.1 IMGT000099 2166089..2166166 RUp15 SBKD01000511 97283..97360
IGHD3-28 IGHD3-28*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1658117..1658200 17573 CM000293.1, IGHD3-2*01 NW_001121238 complement(256633..256716)
rheMacS_CGG.01 CM017744.1 IMGT000099 2176166..2176249
IGHD3-28*02 F 7 + + RUp15 SBKD01000511 107323..107406
IGHD3-34 IGHD3-34*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1667563..1667640 17573 CM000293.1, IGHD3-3*01 NW_001121238 complement(247221..247298)
rheMacS_CGG.01 CM017744.1 IMGT000099 2185615..2185692
RUp15 SBKD01000511 116764..116841
IGHD3-40 IGHD3-40*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1676958..1677050 17573 CM000293.1, IGHD3-4*01 NW_001121238 complement(237841..237933)
rheMacS_CGG.01 CM017744.1 IMGT000099 2195007..2195099
RUp15 SBKD01000511 126127..126219
IGHD4 IGHD4-4 IGHD4-4*01 F 7 AG07107 CM014342.1 IMGT000064 MAP 1618544..1618615 rheMacS_CGG.01 CM017744.1 IMGT000099 2136361..2136432
RUp15 SBKD01000511 67639..67710
IGHD4-11 IGHD4-11*01 F (5) 7 + + AG07107 CM014342.1 IMGT000064 MAP 1628604..1628673 rheMacS_CGG.01 CM017744.1 IMGT000099 2146445..2146514
RUp15 SBKD01000511 77691..77760
IGHD4-17 IGHD4-17*01 F (6) 7 + + AG07107 CM014342.1 IMGT000064 MAP 1638138..1638219 rheMacS_CGG.01 CM017744.1 IMGT000099 2156070..2156151
RUp15 SBKD01000511 87312..87393
IGHD4-23 IGHD4-23*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1649260..1649331 rheMacS_CGG.01 CM017744.1 IMGT000099 2167231..2167302
RUp15 SBKD01000511 98425..98496
IGHD4-29 IGHD4-29*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1659264..1659338 17573 CM000293.1, IGHD4-1*01 NW_001121238 complement(255495..255569)
rheMacS_CGG.01 CM017744.1 IMGT000099 2177313..2177387
IGHD4-29*02 F 7 + + RUp15 SBKD01000511 108470..108544
IGHD4-35 IGHD4-35*01 F 7 AG07107 CM014342.1 IMGT000064 MAP 1668705..1668776 17573 CM000293.1, IGHD4-3*01 NW_001121238 complement(246084..246155)
rheMacS_CGG.01 CM017744.1 IMGT000099 2186758..2186829
RUp15 SBKD01000511 117906..117977
IGHD4-41 IGHD4-41*01 F 7 17573 CM000293.1, IGHD4-4*01 NW_001121238 (1) complement(236707..236778) rheMacS_CGG.01 CM017744.1 IMGT000099 2196162..2196233
RUp15 SBKD01000511 127275..127346
IGHD5 IGHD5-5 IGHD5-5*01 F 7 AG07107 CM014342.1 IMGT000064 MAP 1619508..1619586 rheMacS_CGG.01 CM017744.1 IMGT000099 2137325..2137403
RUp15 SBKD01000511 68604..68682
IGHD5-12 IGHD5-12*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1629572..1629647 17573 CM000293.1, IGHD5-1*01 NW_001121239 complement(6819..6894)
rheMacS_CGG.01 CM017744.1 IMGT000099 2147413..2147488
RUp15 SBKD01000511 78658..78733
IGHD5-18 IGHD5-18*01 ORF (7) 7 AG07107 CM014342.1 IMGT000064 MAP 1640016..1640091 rheMacS_CGG.01 CM017744.1 IMGT000099 2157948..2158023
RUp15 SBKD01000511 89190..89265
IGHD5-24 IGHD5-24*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1650224..1650302
IGHD5-24*02 F 7 + + rheMacS_CGG.01 CM017744.1 IMGT000099 2168199..2168277 RUp15 SBKD01000511 99393..99471
IGHD5-30 IGHD5-30*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1660230..1660308 17573 CM000293.1, IGHD4-2*01 NW_001121238 complement(254553..254575) (2)
RUp15 SBKD01000511 109436..109514
IGHD5-30*02 F 7 + + rheMacS_CGG.01 CM017744.1 IMGT000099 2178282..2178361
IGHD5-36 IGHD5-36*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1669657..1669732 rheMacS_CGG.01 CM017744.1 IMGT000099 2187708..2187783
RUp15 SBKD01000511 118855..118930
IGHD5-36*02 F 7 + + 17573 CM000293.1, IGHD5-2*01 NW_001121238 complement(245130..245205)
IGHD5-42 IGHD5-42*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1678549..1678626 17573 CM000293.1, IGHD5-3*01 NW_001121238 complement(235736..235813)
rheMacS_CGG.01 CM017744.1 IMGT000099 2197127..2197204
RUp15 SBKD01000511 128240..128317
IGHD6 IGHD6-6 IGHD6-6*01 F 7 AG07107 CM014342.1 IMGT000064 MAP 1621878..1621954 17573 CM000293.1, IGHD6-1*01 NW_001121239 complement(15106..15182)
rheMacS_CGG.01 CM017744.1 IMGT000099 2139721..2139797
RUp15 SBKD01000511 70971..71047
IGHD6-13 IGHD6-13*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1631426..1631499 17573 CM000293.1, IGHD6-2*01 NW_001121239 complement(4965..5038)
rheMacS_CGG.01 CM017744.1 IMGT000099 2149267..2149340
RUp15 SBKD01000511 80512..80585
IGHD6-19 IGHD6-19*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1641855..1641928 rheMacS_CGG.01 CM017744.1 IMGT000099 2159799..2159870
RUp15 SBKD01000511 91022..91093
IGHD6-25 IGHD6-25*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1652535..1652611 17573 CM000293.1, IGHD6-3*01 NW_001121238 complement(262815..262891)
rheMacS_CGG.01 CM017744.1 IMGT000099 2170510..2170586
RUp15 SBKD01000511 101705..101781
IGHD6-31 IGHD6-31*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1662579..1662655 17573 CM000293.1, IGHD6-4*01 NW_001121238 complement(252203..252279)
RUp15 SBKD01000511 111786..111862
IGHD6-31*02 F 7 + + rheMacS_CGG.01 CM017744.1 IMGT000099 2180635..2180711
IGHD6-37 IGHD6-37*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1671533..1671609 17573 CM000293.1, IGHD6-5*01 NW_001121238 complement(243253..243329)
rheMacS_CGG.01 CM017744.1 IMGT000099 2189584..2189660
RUp15 SBKD01000511 120719..120795
IGHD6-43 IGHD6-43*01 F 7 + + AG07107 CM014342.1 IMGT000064 MAP 1680875..1680948 17573 CM000293.1, IGHD6-6*01 NW_001121238 complement(233414..233487)
rheMacS_CGG.01 CM017744.1 IMGT000099 2199453..2199526
RUp15 SBKD01000511 130562..130635
IGHD7 IGHD7-45 IGHD7-45*01 F 7 AG07107 CM014342.1 IMGT000064 MAP 1702811..1702877 17573 CM000293.1, IGHD7-1*01 NW_001121238 complement(211988..212054)
rheMacS_CGG.01 CM017744.1 IMGT000099 2220933..2220999
RUp15 SBKD01000511 152139..152205

MAP: Mapped reference sequences.

IMGT notes:
  1. (1) Sequence not in locus reference sequence (assembly Mmul_10). IGHD1-1-1 identified on NW001121239 may be a genome assembly artefact.
  2. (2) Positions of D-REGION
  3. (3) noncanonical 3'D-HEPTAMER:ccctatg instead of cacagtg, however this D-GENE has been found rearranged
  4. (4) noncanonical 5'D-HEPTAMER:cacagca instead of cactgtg, however this D-GENE has been found rearranged
  5. (5) noncanonical 3'D-HEPTAMER:ccaagtg instead of cacagtg, noncanonical 3'D-NONAMER:gcagaaact instead of acaaaaacc, however this D-GENE has been found rearranged
  6. (6) unexpected 5'D-SPACER length: 22 nt instead of 12 nt, however this D-GENE has been found rearranged
  7. (7) noncanonical 5'D-HEPTAMER:ggttgtg instead of cactgtg
Created:
15/02/2021
Last updated:
22/09/2023
Authors:
Viviane Nguefack Ngoune, Alexandre Albani, Gérard Lefranc, Sofia Kossida, Marie-Paule Lefranc