Here you are: IMGT Web resources > IMGT Repertoire (IG and TR) > 1. Locus and genes

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT subgroup IMGT gene name IMGT allele name Fct Chromosomal
localization		 R T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Isolate Clone names Accession numbers Positions in the sequence
(D-GENE-UNIT)		 Secondary accession numbers Isolate Clone names Accession numbers Positions in the sequence
(D-GENE-UNIT)
IGHD1 IGHD1-3 IGHD1-3*01 F 1 mLemCat1 CM036472.1 IMGT000097 MAP 422555..422627
IGHD1-7 IGHD1-7*01 F 1 mLemCat1 CM036472.1 IMGT000097 MAP 431170..431242
IGHD2 IGHD2-1 IGHD2-1*01 F 1 mLemCat1 CM036472.1 IMGT000097 MAP 420458..420544
IGHD3 IGHD3-2 IGHD3-2*01 ORF (1) 1 mLemCat1 CM036472.1 IMGT000097 MAP 421187..421268
IGHD3-4 IGHD3-4*01 ORF (1) 1 mLemCat1 CM036472.1 IMGT000097 MAP 426794..426875
IGHD3-8 IGHD3-8*01 F 1 mLemCat1 CM036472.1 IMGT000097 MAP 422203..422303
IGHD4 IGHD4-10 IGHD4-10*01 ORF (3) 1 mLemCat1 CM036472.1 IMGT000097 MAP 429429..429504
IGHD5 IGHD5-5 IGHD5-5*01 ORF (2) 1 mLemCat1 CM036472.1 IMGT000097 MAP 428667..428742
IGHD6 IGHD6-6 IGHD6-6*01 ORF (6) 1 mLemCat1 CM036472.1 IMGT000097 MAP 430601..430674
IGHD6-9 IGHD6-9*01 ORF (4) 1 mLemCat1 CM036472.1 IMGT000097 MAP 422412..422491
IGHD6-11 IGHD6-11*01 ORF (5) 1 mLemCat1 CM036472.1 IMGT000097 MAP 430974..431050
MAP: mapped sequences.

IMGT notes:
  1. (1) noncanonical 5'D-NONAMER:ggattgggg instead of ggatttttgt, noncanonical 3'D-HEPTAMER: cacggca instead of cacagtg
  2. (2) noncanonical 5'D-NONAMER:atttattgt instead of ggatttttgt, noncanonical 5'D-HEPTAMER: ggctgtg instead of cactgtg, noncanonical 3'D-NONAMER: gcagcaacc instead of acaaaaacc
  3. (3) noncanonical 5'D-NONAMER:ccttgttgt instead of ggatttttgt, noncanonical 3'D-NONAMER: ctcaaaact instead of acaaaaacc
  4. (4) noncanonical 5'D-HEPTAMER:taccgtg instead of cactgtg, noncanonical 3'D-NONAMER: cctaaaact instead of acaaaaacc
  5. (5) noncanonical 5'D-HEPTAMER:taccgtg instead of cactgtg
  6. (6) noncanonical 5'D-NONAMER: ggtttctgg instead of ggatttttgt
IMGT references:
  1. [1] Marques T. et al., Unpublished.
  2. [2] Johnson,J. et al., Unpublished.
Created:
03/08/2022
Last updated:
22/09/2023
Authors:
Turkan Samadova