IMGT Repertoire (IG and TR)

Fct: FUNCTIONALITY
- F: Functional
- P: Pseudogene
- ORF: Open Reading Frame
R: Rearranged
T: Transcribed
Pr: Translated into protein

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

Click on:

IMGT gene name to get the corresponding IMGT/GENE-DB entry,
IMGT allele name to see the corresponding Alignments of alleles,
accession number to get the corresponding IMGT/LIGM-DB entry.

cDNAs have been included in this table as they are informative for the gene content of the corresponding genomic cassettes.

Cassette		Clone name	Gene name	Accession numbers
Cassette
1	#c	c1	IGIV1S1	AF137397
			IGIJ1S1
			IGIC1S1
2	#c	c10	IGIV1S2	AF137398
			IGIJ1S2
			IGIC1S2

#c: rearranged cDNA.

See also (IMGT Scientific chart):

Created:: 10/06/2003
Last updated:: 22/09/2023
Authors:: Nathalie Bosc

IMGT Repertoire (IG and TR)

Gene table - Cassette gene content: spotted wolffish (Anarhichas minor) IGI