IMGT Repertoire (IG and TR)

Gene table: spotted wolffish (Anarhichas minor) IGIV

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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The Spotted wolffish (Anarhichas minor) IGIV genes and alleles have a temporary designation based on the IMGT gene name nomenclature rules for the unmapped genes, the incomplete loci, or the cDNAs in the absence of germline genes.
Spotted wolffish (Anarhichas minor) variable genes are designated by the locus three letter root, followed by the letter V, the subgroup number, the letter S and a number.

See Correspondence between nomenclatures: Teleostei IGIC

IMGT subgroup IMGT gene name IMGT allele name Fct R T Pr Positions in the locus IMGT/LIGM-DB reference sequences IMGT/LIGM-DB sequences from the literature
Strain Clone names Accession numbers Positions in the sequence Secondary accession numbers Strain Clone names Accession numbers Positions in the sequence
IGIV1 IGIV1S1 IGIV1S1*01 (F) + + c1 AF137397 [1] #c
IGIV1S2 IGIV1S2*01 (F) + + c10 AF137398 [1] #c

#c: rearranged cDNA.

IMGT references:
  1. [1] Espelid S. et al., Fish Shellfish Immunol., 11, 399-413 (2001). PMID:11478516
Last updated:
Sylvaine Artero, Nathalie Bosc