IMGT Repertoire (IG and TR)

Gene table: Three spined stickleback (Gasterosteus aculeatus) IGIC

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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Three spined stickleback (Gasterosteus aculeatus) constant genes are designated by the locus three letter root, followed by the letter C, the subgroup number, the letter S and a number.

IMGT gene name IMGT allele name Fct T Pr Positions in the locus IMGT/LIGM-DB reference sequences IMGT/LIGM-DB sequences from the literature
Strain Clone names Exons Accession numbers Positions in the sequence Secondary accession numbers Strain Clone names Accession numbers Positions in the sequence
IGIC1S1 IGIC1S1*01 (F) Igl1 AY278356 [1] c

c: cDNA sequence.

IMGT references:
  1. [1] Haas-Assenbaum A. et al., Unpublished (2003).
Last updated:
Nathalie Bosc